Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1014 ATGGATTATCTAAATGCTCTTGTTCATGGAGCACATACTTTTGGGTGTCCAAATGTGAGTATCAATAGCTGGGCTAAGTTTCCAATCTATGATGCAGACTTTGGTTGGGGAAGACCGATCTTCATGAGACTAGGCTGGATTATACACGAGGGGCTAACAATCATAATTCCAAGATCAATAAATGATGGCAGCTTGTATTTGGCAATGGCTCTACCACCTCATCATATGAAGCTGTTTCAAGAATTCCTTTATGACATTTGA 261 0.3985 MDYLNALVHGAHTFGCPNVSINSWAKFPIYDADFGWGRPIFMRLGWIIHEGLTIIIPRSINDGSLYLAMALPPHHMKLFQEFLYDI* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1014 86 Pfam Transferase family 15 82 - -
Pvu5g1014 86 Gene3D - 1 86 IPR023213 -
Pvu5g1014 86 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 85 - -
Pvu5g1014 86 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1014 Pvu-Chr5 29302188 29302448 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1014 4 86 Monolignol Biosynthesis Gene Families AT5G48930 61.446 1.27e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1014 K13065 - pvu:PHAVU_005G098000g 188.734