Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1012 ATGGCGCAATTACCTCCAAAGATCCCAAACGTGTCACCAAGTTGGCCAGACTTCTCTTCTCAACACCAGAAGATGCCATTGCCACCTCTTAACAACGGCACCACCAACAACAACACAGGCCATTATCAGCATCATCAAAACCCTTCTTGGGTGGACGAGTTCCTCGACTTCTCCTCCGCCCGGCGCGGCGCTCACAGGCGGTCGGTGAGCGATTCCATCACCTACTTGGACGCACCAATAAGGTGTGGTGAGAACAGCAATAATAACAATAATAATAGTAATGAGAATGAGTTCGACAAGTTTGATGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGCTCTCTGGGGTCCCCTTGCCACCACCAACTACCTTGTCCTCCTCTAACCCTTCTAGCCCTTCCGACCAGAACTTCTTCCATGATGAGAAAGAGAGAAGCCGGAAGGAAATGAAGCTGCAGAAGGAGGACGAGGAGCACCGCCATCAATTGAAAAATGAAGCAGATGAGGTTGAAAGCCAATGCATACAGGAAATTATGCAGCCTCCAAATGACACCAATACTTCTTCTTCCAATGAGAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTAGCTAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGAGAAGTGCAACTTCATTACAGGCTGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTAGACAACAGTGCTCTCAAGCAAAGAATCGCTGCCCTTGCTCAAGACAAGATCTTTAAAGATGCTCATCAAGACGCGCTGAAGAGGGAGATAGAGAGACTGAGGCAAGTTTATCACCAACAAAGCCTCAAGAAGATGGAAAATGCTGCAGGGTCACCATTACCATTACCAAATTCTATATGTGAAGTTCAAACAGAAAAGGAAGTACAACTTCTCAACGTTTGA 990 0.4556 MAQLPPKIPNVSPSWPDFSSQHQKMPLPPLNNGTTNNNTGHYQHHQNPSWVDEFLDFSSARRGAHRRSVSDSITYLDAPIRCGENSNNNNNNSNENEFDKFDDEQFMSMFTDEVVLSGVPLPPPTTLSSSNPSSPSDQNFFHDEKERSRKEMKLQKEDEEHRHQLKNEADEVESQCIQEIMQPPNDTNTSSSNERITDPKRVKRILANRQSAQRSRVRKLQYISELERSATSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQDALKREIERLRQVYHQQSLKKMENAAGSPLPLPNSICEVQTEKEVQLLNV* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1012 329 MobiDBLite consensus disorder prediction 139 172 - -
Pvu5g1012 329 Coils Coil 279 299 - -
Pvu5g1012 329 Gene3D - 199 298 - -
Pvu5g1012 329 SUPERFAMILY Leucine zipper domain 200 254 IPR046347 GO:0003700|GO:0006355
Pvu5g1012 329 Pfam bZIP transcription factor 200 243 IPR004827 GO:0003700|GO:0006355
Pvu5g1012 329 SMART brlzneu 196 260 IPR004827 GO:0003700|GO:0006355
Pvu5g1012 329 PANTHER BASIC LEUCINE ZIPPER 34 1 328 - -
Pvu5g1012 329 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 328 - -
Pvu5g1012 329 MobiDBLite consensus disorder prediction 1 46 - -
Pvu5g1012 329 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Pvu5g1012 329 MobiDBLite consensus disorder prediction 117 172 - -
Pvu5g1012 329 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 250 IPR004827 GO:0003700|GO:0006355
Pvu5g1012 329 CDD bZIP_plant_RF2 201 251 IPR044759 GO:0003700|GO:0006355
Pvu5g1012 329 Coils Coil 142 175 - -
Pvu5g1012 329 MobiDBLite consensus disorder prediction 13 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1012 Pvu-Chr5 29035321 29039976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1012 1 277 bZIP Transcription Factor Family AT3G58120 54.426 2.79e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu5g1012 bZIP_2 1.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1012 - - gmx:100815433 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1012 5 29035321 29039976 Pvu5g1012 5 29035321 29039976 ECH