Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1010 ATGCGCAACAGAGAACCATTTCCTCCGTGCCGCCTCTTTCTTCTTCTGTTTCTATGTGGCTTTGTCGGCGGCGACACGCCGTCGCGGGAGGTGTGGTGCGTGGCCAAGAACAACGCGGAGGACGCGGCGCTGCAGTCGGCGGTGGAGTGGACCTGCGGCGCGGGGGGAGCCGATTGCGGAGCGATCCAGGGAGGAGGACCCTGCTTCGACCCTTCCAGCGTGCAGAATACGGCGTCGTACGCTTTCAATGATTACTTCCGGAAACACACTATCACCGAAGAGAATTGTAACTTCGGCAACAATGCCGCCATCACCTCCTTGAACCCCAGTTTCGGTAATTGCAAGTTCCCTTCTAGTTCGTTAGTGAACAATGGGAGCTTCTCGGGATCCGCGTCGTCGATGGGATCGGTGCCCGGTGAAGATACGAGTGGGTGCGGTGGAGTTGTTTGGAGGTGGTCGTTTTGGCCATTTTTATTCTTTACAGTTTCATTTTCACCCATTGTTTAA 507 0.5542 MRNREPFPPCRLFLLLFLCGFVGGDTPSREVWCVAKNNAEDAALQSAVEWTCGAGGADCGAIQGGGPCFDPSSVQNTASYAFNDYFRKHTITEENCNFGNNAAITSLNPSFGNCKFPSSSLVNNGSFSGSASSMGSVPGEDTSGCGGVVWRWSFWPFLFFTVSFSPIV* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1010 168 PANTHER BETA-1,3 GLUCANASE 22 131 - -
Pvu5g1010 168 Pfam X8 domain 32 102 IPR012946 -
Pvu5g1010 168 Gene3D - 27 132 - -
Pvu5g1010 168 SMART X8_cls 31 116 IPR012946 -
Pvu5g1010 168 PANTHER BETA-1,3 GLUCANASE 22 131 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1010 Pvu-Chr5 28983632 28984637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1010 25 117 Glycoside Hydrolase AT4G34480 46.392 3.54e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1010 - - gmx:100795871 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1010 5 28983632 28984637 Pvu5g1010 5 28983632 28984637 ECH
Pvu11g1577 11 39856252 39859644 Pvu5g1010 5 28983632 28984637 PCT