Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0983 ATGGACTCCATCGCCGGAGCTCCGCCTCACACAGCAAACCCTCCACCGTCTCGGCCGTCGCCGTTCCCCGGCCGGGAAGACTGCTGGTCGGAGGAAGCCACGTTCACGCTCATCGAGGCGTGGGGAGAGCGCCACCTCGAACTCAACCGCGGGAACCTCCGCCAGAGGCACTGGCAAGAGGTCGCCGACACCGTCAACGCACGTCACGGCCACGCCGGCGCCAGGTCCCGCCGCACCGACGTGCAGTGCAAGAACCGCATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGATTCCGGCGATTCCGCCACCACCTGGCCGTTCTTTCGCCGCCTTGAGTTCCTCGTCGGCGACAATTTCCCGGCGAAGAAGCCTTCCCCGCCGGAGGCAACATCCGGCGATCGACGGAGCACTCCTCCGGCTAAGTCCCCGTCGTGGGCTCTCATTCCGGTCGGTCCTCGATCCCGCTCGCAGAAGCGGCCGACGCCGGCCGCGCCGGCGGCAGAGAGCGTCGCCGACTCGTACTTCCGGCGGAATTTCTCGGTTTTTGCTGCGGCGGCGGCCGCAGCCGCCGAGGCCGATAGCGATAATTCGAACGGTTCTAAATGGAGCAGTGGTAGTGAGAAGAGAGAGAAGAAGAAAAGAGAAAGAGATTGGGAATTTGGTTACAGAGAGGTCGCAGAAGCGTTGGAGAGGTTTGGGGAGATTTATGAGAGAGTTGAAGAAGCTAAACAGAGGCAAATGGTTGAGTTGGAGAAACAGAGAATGCAGTTTGCTAAGGATTTGGAAACCCAGAGAATGAAACTCTTCATGGAAACTCAGCTTCACTTGCAAAAAATGAATCGCTCCAACTCTAAACGTTCTTCTGCAACTGACAGTGTCTCATAA 903 0.5847 MDSIAGAPPHTANPPPSRPSPFPGREDCWSEEATFTLIEAWGERHLELNRGNLRQRHWQEVADTVNARHGHAGARSRRTDVQCKNRIDTLKKKYKIEKARVSDSGDSATTWPFFRRLEFLVGDNFPAKKPSPPEATSGDRRSTPPAKSPSWALIPVGPRSRSQKRPTPAAPAAESVADSYFRRNFSVFAAAAAAAAEADSDNSNGSKWSSGSEKREKKKRERDWEFGYREVAEALERFGEIYERVEEAKQRQMVELEKQRMQFAKDLETQRMKLFMETQLHLQKMNRSNSKRSSATDSVS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0983 300 SMART 118neu2 36 125 IPR006578 -
Pvu5g0983 300 MobiDBLite consensus disorder prediction 124 171 - -
Pvu5g0983 300 Gene3D - 29 96 - -
Pvu5g0983 300 MobiDBLite consensus disorder prediction 1 26 - -
Pvu5g0983 300 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 2 294 - -
Pvu5g0983 300 MobiDBLite consensus disorder prediction 281 300 - -
Pvu5g0983 300 MobiDBLite consensus disorder prediction 196 222 - -
Pvu5g0983 300 Coils Coil 231 262 - -
Pvu5g0983 300 Pfam Myb/SANT-like DNA-binding domain 26 119 IPR044822 -
Pvu5g0983 300 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 294 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0983 Pvu-Chr5 28377801 28381903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0983 180 296 Trihelix Transcription Factor Family AT3G14180 38.655 2.14e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu5g0983 Myb_DNA-bind_4 2.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0983 - - gmx:100784918 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0983 5 28377801 28381903 Pvu5g0983 5 28377801 28381903 ECH