Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0982 ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTGTCGTGGTGGCCTTCAGATTTTGTTGAAAAATTTGGATCTGTTTCTTTGGATTCTCATGATGAGACACTAAGTAATAAAGAATCTCCTCGACATTTTGTTAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGTGCACTGGAATGCTTTCAGAACCCATACCAAATGGTTTTTACTCCGTTATTCCCGAAAAAAGACTCAAGGAACTTTTTGATAATATTCCTACCTTGGACGAGCTTCATGCTTTGAGTGGAGAGGGTTTTAAGGCTGATATCATTCTTGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTAAAGCAATTGATTGTGGCACTAGTTAAAGGATTAAACTCAAATCCGGCTGCCATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGTCCCAATGCGGAAAGTCCAGCAAAAGCTGCTCTAGATGAAACCTCTAACATGTTTGAGAATCGAGGAGTCCAGATGCTGGGACAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTCGGTCTTGAAAGTAGGCTCATGGTGGGCTTGCCAAATGATGGAGTTACTGAATGTCAAGACTCGTACAAGCATATGTCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGTTTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGGTGCAGGAGAGAGTGATTCAGCTGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGCCCTTTGTTTGGGGTTTCAGAGAGTGTTGAGAAGGAGGAAAGCCTCCAATTCCATAGAAAATTTGAACCATCTTCAAATGCATTGGGCCTTTCCTTGAGAAATGTGATGTTGAAATCAAATAACAGTTTGAGCTTGTCTTATAGTGAACCCAACATTGGCACTACATTAGGTCGGCGTAGTCGGAGAAAGATCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCAATTCGAGCACGTGGACGGTCCATGCTTAGTGGTGATAGGAGTGGTGATAGGACAGCATTTAGAGATTTTACTGATGATCAAGCTACATCAAGATCTAGCTATAGGTCAGATGGCGCATCCTCGTCAGAAGCCCGTAGGATAAGAAGAAGAAGCATCAGCATTACACCTGAGATTGGAGATGATATCGTAAGGGCTGTGCGGGCTATGAATGAAACTCTGAAGCAAAATCGTCTCTTGAGAGAACGAGGGGATGATAACTCTCCGAACAATAATAGTAGTGATGCAAACCTTCAGAAAAATGTGTCAAATTTCCATCATGATGCTCTATATTCTTGTCAGCATGACCAAGGAAATTCACAGAAGGCAATGTCGTTACCATCTTCACCACATGATTATAGAGGTCATGCTTCGGAGAGAAGTGGACCGTCGAGATACGGAGTGAATGATGAAATGGAGTCAACTTGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTTTGTTACCGTATGAAAAATGGAATATTGACTTCTCTGAATTGACTGTTGGAACTCGAGTAGGGATTGGTTTCTTTGGAGAGGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGTAATGAGATATCTATTCTGAGCCGACTCCGACATCCTAATGTTATCTTGTTTCTCGGTGCATGCACAAAGCCTCCACGCTTGTCAATGATTACAGAATATATGGAATTGGGATCGTTGTATTACTTGATACATTTAAGTGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTAAGGATGTTACGTGACATATGCAAGGGTTTGATGTGCATACATCGAATGAAGATTGTTCACCGTGATCTGAAAAGCGCAAATTGTCTGGTGAATAAGCATTGGACTGTGAAAATATGTGATTTTGGGCTTTCAAGATTAATGACAGAGTCTCCCATGAGAGATTCTTCCTCGGCTGGAACTCCAGAATGGATGGCTCCTGAGCTCATTCGAAACGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAACTCTGCACCTTGAGCAGACCATGGGAAGGAGTACCACCTGAGAGGGTGGTTTATTCCGTTGCAAATGAGGCTTCCAGATTGGAAATACCAGAAGGCCCTCTAGGAAGGCTGATTTCAGAATGTTGGGCAGAATCTCTTGAGAGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTGATGGACATCGAGTACTCCTTGTGCTGA 2418 0.4148 MEETREDAGPTEQGPSNVSWWPSDFVEKFGSVSLDSHDETLSNKESPRHFVKDVLSSQKASQTLWCTGMLSEPIPNGFYSVIPEKRLKELFDNIPTLDELHALSGEGFKADIILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNAESPAKAALDETSNMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNDGVTECQDSYKHMSLIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSESVEKEESLQFHRKFEPSSNALGLSLRNVMLKSNNSLSLSYSEPNIGTTLGRRSRRKIIAEQRTASSSPEHPSIRARGRSMLSGDRSGDRTAFRDFTDDQATSRSSYRSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSPNNNSSDANLQKNVSNFHHDALYSCQHDQGNSQKAMSLPSSPHDYRGHASERSGPSRYGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYYLIHLSGQKKKLNWRRRLRMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRLMTESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYSVANEASRLEIPEGPLGRLISECWAESLERPSCEEILSRLMDIEYSLC* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0982 805 SMART serkin_6 549 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0982 805 ProSiteProfiles Protein kinase domain profile. 549 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0982 805 Gene3D Transferase(Phosphotransferase) domain 1 628 804 - -
Pvu5g0982 805 MobiDBLite consensus disorder prediction 271 291 - -
Pvu5g0982 805 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 803 - -
Pvu5g0982 805 MobiDBLite consensus disorder prediction 1 20 - -
Pvu5g0982 805 MobiDBLite consensus disorder prediction 354 415 - -
Pvu5g0982 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Pvu5g0982 805 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 803 - -
Pvu5g0982 805 Gene3D Phosphorylase Kinase; domain 1 542 627 - -
Pvu5g0982 805 CDD STKc_MAP3K-like 555 797 - -
Pvu5g0982 805 MobiDBLite consensus disorder prediction 376 391 - -
Pvu5g0982 805 MobiDBLite consensus disorder prediction 392 407 - -
Pvu5g0982 805 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
Pvu5g0982 805 Pfam Protein tyrosine and serine/threonine kinase 550 797 IPR001245 GO:0004672|GO:0006468
Pvu5g0982 805 MobiDBLite consensus disorder prediction 441 465 - -
Pvu5g0982 805 ProSitePatterns Protein kinases ATP-binding region signature. 555 576 IPR017441 GO:0005524
Pvu5g0982 805 MobiDBLite consensus disorder prediction 482 514 - -
Pvu5g0982 805 SUPERFAMILY Protein kinase-like (PK-like) 523 797 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0982 Pvu-Chr5 28346580 28371440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0982 1 805 MAP Kinase Kinase Kinase AT3G58640 70.120 0.0 1160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Pvu5g0982 PK_Tyr_Ser-Thr 2.4e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0982 - - gmx:100803469 1439.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0982 5 28346580 28371440 Pvu5g0982 5 28346580 28371440 ECH
Pvu5g0982 5 28346580 28371440 Pvu11g1341 11 28778777 28784293 PCT