Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0976 ATGGACGAAGATTACGGCTACAGAAGGAAGGCCAAGATTGCACTCATCGCCATTATTGTCCTCGCTTCCCTCGCCGTCTTTGCCTTGCTCGTTGCCTTTGCTTACTACTGCTACATCCTCAACAAGGTCTCCAACCGCCGCAAAAGCCTCAAAAAAGTTGAAGACGCTAACCTTAATGAGAATAGTGACTTTGCAAATCTGCAAGTTATTGCCGAGAAAGGACTTCAGGTGTTCACTTTCAAGCAGCTGCATTCTGCTACAGGGGGCTTTAGCAAGTCGAATGTCATTGGTCATGGTGGATTTGGACTTGTTTACCGAGGAGTGCTCAATAATGGCAGGAAAGTTGCAATTAAATTCATGGATCAGGCAGGAAAGCAAGGGGAAGAAGAATTTAAAGTAGAGGTGGAATTGCTAAGGCGGTTGCATTCACCATATCTGCTGGCATTGCTTGGGTACTGCTCTGATAGTAATCATAAATTGCTGGTGTATGAATTTATGGCAAATGGTGGACTGCAGGAACATCTTTATCCTGTTAGCAATTCTATAATAACACCCGTAAAGTTGGATTGGGAAACTCGCTTAAGAATAGCACTTGAAGCTGCAAAGGGATTGGAATATCTTCATGAGCATGTCAGTCCCCCAGTTATTCACAGAGATTTTAAGAGCAGTAACATCCTCTTGGATAAGAAATTTCATGCCAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGACCTGATAGAGCTGGTGGACATGTTTCAACTCGAGTTTTGGGCACCCAAGGATATGTTGCCCCTGAATATGCACTAACAGGGCATTTGACCACAAAATCAGATGTGTACAGTTATGGTGTTGTACTTTTAGAGCTGCTCACTGGCCGAGTGCCAGTAGATATGAAGAGACCTCCAGGAGAAGGTGTTCTTGTTTCTTGGGCTCTGCCTCTTTTGACTGATAGAGAAAAGGTTGTCAAGATTATGGATCTTTCACTAGAAGGACAGTACTCTATGAAAGAGGTTGTGCAGGTGGCTGCAATTGCCGCAATGTGTGTGCAACCAGAGGCAGATTATCGTCCTCTCATGGCAGATGTTGTGCAGTCATTGGTTCCTCTGGTCAAGACTCAAAGGTCCCCTTCAAAGGTGGGAAGCTGCTCTAGTTTCCACTCCCCCAAGTTGTCCCCCGGCCCAACATCCAGTTAG 1194 0.4506 MDEDYGYRRKAKIALIAIIVLASLAVFALLVAFAYYCYILNKVSNRRKSLKKVEDANLNENSDFANLQVIAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGLVYRGVLNNGRKVAIKFMDQAGKQGEEEFKVEVELLRRLHSPYLLALLGYCSDSNHKLLVYEFMANGGLQEHLYPVSNSIITPVKLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGPDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREKVVKIMDLSLEGQYSMKEVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTQRSPSKVGSCSSFHSPKLSPGPTSS* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0976 397 ProSiteProfiles Protein kinase domain profile. 90 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0976 397 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
Pvu5g0976 397 SUPERFAMILY Protein kinase-like (PK-like) 72 366 IPR011009 -
Pvu5g0976 397 PANTHER OS07G0227300 PROTEIN 5 389 - -
Pvu5g0976 397 MobiDBLite consensus disorder prediction 375 397 - -
Pvu5g0976 397 Pfam Protein kinase domain 91 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0976 397 Gene3D Phosphorylase Kinase; domain 1 50 165 - -
Pvu5g0976 397 CDD STKc_IRAK 96 369 - -
Pvu5g0976 397 PANTHER OS01G0750732 PROTEIN 5 389 - -
Pvu5g0976 397 Gene3D Transferase(Phosphotransferase) domain 1 166 382 - -
Pvu5g0976 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0976 Pvu-Chr5 28157717 28162549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0976 1 392 Receptor kinase-like Gene Family AT3G58690 76.531 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pvu5g0976 Pkinase 8.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0976 - - gmx:100804893 737.258