Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0974 ATGGCCTCTATGCCGTTGGGGCAGCAGCAACAGCTTCAACCACCGCAAGTGGCAACTCCGCCGCAACAACCGCCACAAGCGGAGAATGACTCTATGAAAGTGGACTCTCGCGGCGGCTCTGACGCCGCCTCCAATAAGGAAATGTCTGCTCCTGTCGCAGAGGGTAATGAAGCACATGCACTCACTGGTCATATAATCTCAACCACAATTGGTGGAAAAAATGGTGAACCTAAAAGAACTATCAGTTACATGGCCGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGATACAAAAATCGGGAATTGCAGTTAATGCGCATGATGGATCACCCAAATGTAATTTCCCTGAGGCACTGTTTCTTCTCTACAACAAGCAGAGATGAGCTTTTTCTGAACTTGGTGATGGAATATGTCCCTGAGACGATCTACCGAGTTATAAAGCACTACAGTAGTATAAACCAGAGAATTCCCCTAATCTATGTGAAATTATATACATATCAAATCTTTAGGGGACTGGCATATATCCATACCGTACCAGGAGTTTGCCATAGGGATGTGAAACCTCAAAATCTTTTGGTGGATCCACTCACACATCAAGTCAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTGAAGGGTGAATCGAACATCTCATACATATGCTCACGGTACTATCGGGCCCCAGAACTAATATTTGGTGCGACAGAGTACACAACTTCTGTTGATATCTGGTCAGCTGGTTGTGTCCTTGCAGAACTTCTTTTAGGCCAGCCTTTGTTCCCGGGAGAAAATCAGGTCGACCAACTTGTTGAAATTATCAAGGTTCTTGGCACTCCTACTCGAGAAGAAATTCGATGCATGAACCCTAATTATACAGATTTCAGATTCCCCCATATCAAAGCTCATCCTTGGCATAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAGTATTCACCAAAACTTCGTTACAGCGCAGTGGAAGCATTGGCACATCCTTTCTTTGACGAGCTTCGTGAGCCCAATGCTCGGCTACCTAATGGTCGTTTATTGCCTCCGCTTTTTAACTTCAAACAGGAATTAGATGGAGCGCCCCCTGAACTGCTTCCTAAGCTCATCCCGGAGCACGTCAGACGGCAGATCGGTTTCGGCTTGCCGACGGACACCCAAACTCAAATGTAA 1278 0.4624 MASMPLGQQQQLQPPQVATPPQQPPQAENDSMKVDSRGGSDAASNKEMSAPVAEGNEAHALTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRMMDHPNVISLRHCFFSTTSRDELFLNLVMEYVPETIYRVIKHYSSINQRIPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSVDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPHIKAHPWHKVFHKRMPPEAIDLASRLLQYSPKLRYSAVEALAHPFFDELREPNARLPNGRLLPPLFNFKQELDGAPPELLPKLIPEHVRRQIGFGLPTDTQTQM* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0974 425 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 29 417 - -
Pvu5g0974 425 ProSitePatterns Protein kinases ATP-binding region signature. 89 113 IPR017441 GO:0005524
Pvu5g0974 425 CDD STKc_GSK3 78 370 IPR039192 -
Pvu5g0974 425 Gene3D Phosphorylase Kinase; domain 1 68 162 - -
Pvu5g0974 425 SMART serkin_6 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0974 425 PANTHER SHAGGY-RELATED PROTEIN KINASE ETA-LIKE 29 417 - -
Pvu5g0974 425 MobiDBLite consensus disorder prediction 1 50 - -
Pvu5g0974 425 Pfam Protein kinase domain 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0974 425 ProSiteProfiles Protein kinase domain profile. 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0974 425 MobiDBLite consensus disorder prediction 1 16 - -
Pvu5g0974 425 SUPERFAMILY Protein kinase-like (PK-like) 82 390 IPR011009 -
Pvu5g0974 425 Gene3D Transferase(Phosphotransferase) domain 1 163 410 - -
Pvu5g0974 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0974 Pvu-Chr5 28123663 28128632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0974 87 397 MAP Kinase Gene Family AT3G59790 36.196 4.67e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pvu5g0974 Pkinase 9.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0974 K14502 - gmx:100788319 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0974 5 28123663 28128632 Pvu11g1325 11 28309336 28314434 PCT