Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0971 ATGTACCACCGTAGATTCAACAAACCGATACATGTCGCTAACCCAGATGAGCCCGAGCCCGAGCCCACCTCAGAAGCTGGGCCTGCTTCTCCCTCTTCCTGTGATGACACTAAAGCAGAAGCACCGTCACCTAAGAAAAGGAGGGAGATGAAGAAAAGGGTGGTGACGGTACCGATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAGACGTATCCACCGTCCGATTCATGGGCCTGGAGGAAATACGGCCAAAAGCCCATCAAAGGCTCCCCTTACCCAAGGGGATACTACCGATGCAGCAGTTCAAAGGGGTGTCCCGCAAGGAAGCAAGTGGAGCGAAGCCGTGTGGACCCCACAAAGCTCATAGTTACCTACGCCAACGACCACAACCACTCCATCCCTCTCCCCAAATCCAATTCCTTCGCCGTTTCCGCCGCTTCCTCGCCGCCCGAGTCCGCCTCCAGGTTTCCGCCGGAGGAGGAAATGGTCGTATTTGCTACTCACACCGATTTTGAACTTGCCGGCGACGCGGCGGTTCTGCTCAGCCACCACCACTTCCGGTGGTTCGATGACGTTGCGTCCACCGGCGTCCTCGAGATCCCGATCTGCGGCGAGGTGGATGACGTGGCGATGCCGATGAGAGAGGAGGACGAGTTGCTCTTCGCCGATCTCGACGAGTTGCCGGAGTGCTCGGTGGTTTTCCGGCGGAGGAATATTCCGAGGAGCAGCGCGATCCGGTGCGGCGGCATCACAGGATAA 762 0.5787 MYHRRFNKPIHVANPDEPEPEPTSEAGPASPSSCDDTKAEAPSPKKRREMKKRVVTVPIGDVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYANDHNHSIPLPKSNSFAVSAASSPPESASRFPPEEEMVVFATHTDFELAGDAAVLLSHHHFRWFDDVASTGVLEIPICGEVDDVAMPMREEDELLFADLDELPECSVVFRRRNIPRSSAIRCGGITG* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0971 253 SUPERFAMILY WRKY DNA-binding domain 70 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu5g0971 253 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 246 IPR044810 GO:0003700
Pvu5g0971 253 SMART WRKY_cls 74 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0971 253 MobiDBLite consensus disorder prediction 1 80 - -
Pvu5g0971 253 Pfam WRKY DNA -binding domain 76 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0971 253 Gene3D WRKY domain 62 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu5g0971 253 ProSiteProfiles WRKY domain profile. 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0971 253 PANTHER OS01G0750100 PROTEIN 18 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0971 Pvu-Chr5 27948848 27951057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0971 3 240 WRKY Transcription Factor Family AT3G58710 49.609 1.38e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu5g0971 WRKY 8.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0971 - - vra:106778551 464.536