Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0966 ACCTGTCCTAACTTGAAAAGGATTGATTTAAGCAACTCCAAGGACCTGGTTGAGACTCCGGATTTTTCCAGAATCATAAAACTTGAAAGACTAGATCTTTCTGGATGTAGGAGTTTATCATATGTCCATTCATCAATTGGACTTCTTAAGAAGCTTGCTTTCTTGAATTTACGAAATTGTTGCAATCTTGTTATGATTGACTTTGGTCGTGTAGGTAACATGAGTTCTCTGAGAGTTATACATCTCTCGGGTTGTAGAGAACTTAAAAGCACTCCAGATTTTACAAGGGCAACACATATTGAGTACCTTGACATGGATAACTGTTCAAATTTATCCACTATTCATGAATCTATTGAAGTCCTTTCAAATCTTACATTCTTGAGTTTGAGATACTGCAGAAACCTTGTCAGTGTATCAGATCGTATATATTCCTTGGTATCTCTTCAAACTCTAGATTTATGCGGCTGTTCTAAACTTACGAAGTTTCTCCCAAGACAAGCTTCTAACCCCCGTTTGGAATGTTTGATTCTTCTGGATCTAAGTTTTTGCTATCTAGAAGAAGTACCTGATGCTATTGGAGAGTTAAGGTGTCTGGAAAGATTGAATCTACGCGGAAACAAATTTGTTTCAGTACCTGATTCCATTAGAAGGCTTCAGTGTCTAGCATATTTAAACTTGTCTGATTGTTATCAACTCGGAGTTTTGCTTGACCTTCCAATTGGTGGAGCTACATCAGGGGGGAGGTATTTTAAAACAGTATCCGGTTCTCGTGATCGTAGGTCAAGCTTATATCTTTTCAATTGTCCCGAGATGGCTAATATATTGTCCAAACCTTGGGATTGTTGGAGTTTGGAACTTGCATGGATTTTCAGACTAATTAAGGAATCTTATCATTTTCGATGTGGCTTTGACATTGTTGTTCCTTGGGGTTTGGAAATTCCACGGTGGTTTTCCAAAAGATTTGAAGGGGATTCGGTTATAAGTATAGTGGAATTTAATGTGGATGAAGACTGGATGGGCTTTGCCTTTTGTGTTATATATGGGCGAAACAATGGTTCCGCGGTTGGTCATTCTTCATGGCACTCATTTTATCTTTCTTTCGTAAGTAAGCATACAGAAGAATACTTTGATATGCAACATGATTTGGAAGTGCAGTATTCTGTTGTATCAAATCATCTTTGGATCATTTATATCTCGAGAGAGCACTGTCATTTTGTGAAAACAGGAGCACATATCTCATTTAAAGCCAAGCCAAGTGTTAAGATCCATAGATGGGGGATGAGGAGTATATTCAAAAAAGATGTACATGACTTTAAAAGGATGCAACAGGGACAACATCTTCCATTCCCTCGTGATGAAGTACACCCTGTGAACTTTGTTTTTGTACAAAAAAGCAACATTAACTTCGGTCCTATATTCCAGCTTCCTTACAATTGGTTACGCACAAAGGAAGATGAAGTAGAGAAAAATGATGCAGAAGTCAAGGAAAACAATTTGTCTTATGCGGGGTTTTAA 1515 0.3776 TCPNLKRIDLSNSKDLVETPDFSRIIKLERLDLSGCRSLSYVHSSIGLLKKLAFLNLRNCCNLVMIDFGRVGNMSSLRVIHLSGCRELKSTPDFTRATHIEYLDMDNCSNLSTIHESIEVLSNLTFLSLRYCRNLVSVSDRIYSLVSLQTLDLCGCSKLTKFLPRQASNPRLECLILLDLSFCYLEEVPDAIGELRCLERLNLRGNKFVSVPDSIRRLQCLAYLNLSDCYQLGVLLDLPIGGATSGGRYFKTVSGSRDRRSSLYLFNCPEMANILSKPWDCWSLELAWIFRLIKESYHFRCGFDIVVPWGLEIPRWFSKRFEGDSVISIVEFNVDEDWMGFAFCVIYGRNNGSAVGHSSWHSFYLSFVSKHTEEYFDMQHDLEVQYSVVSNHLWIIYISREHCHFVKTGAHISFKAKPSVKIHRWGMRSIFKKDVHDFKRMQQGQHLPFPRDEVHPVNFVFVQKSNINFGPIFQLPYNWLRTKEDEVEKNDAEVKENNLSYAGF* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0966 504 Pfam C-JID domain 310 435 IPR045344 -
Pvu5g0966 504 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 10 88 - -
Pvu5g0966 504 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 162 453 - -
Pvu5g0966 504 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 88 161 - -
Pvu5g0966 504 Gene3D Ribonuclease Inhibitor 1 96 IPR032675 -
Pvu5g0966 504 Gene3D Ribonuclease Inhibitor 97 292 IPR032675 -
Pvu5g0966 504 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 88 161 IPR044974 GO:0006952
Pvu5g0966 504 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 88 IPR044974 GO:0006952
Pvu5g0966 504 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 162 453 IPR044974 GO:0006952
Pvu5g0966 504 SUPERFAMILY L domain-like 2 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0966 Pvu-Chr5 27770137 27771809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0966 73 232 WRKY Transcription Factor Family AT4G12020 32.919 8.34e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0966 - - pvu:PHAVU_005G093400g 1043.88