Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0964 ATGAGCACAGAACTTCATTTGCCTGCGCCTGTTTTATTGACTAGGGAGTGTTATTTTGGAAGGTACAGCAAGCAGTTATCTTATAGCACATGGGGAGTCGTAGATGTATCATTGGAGAAATTTCTTCCTTCCCCAACGACCAATTTTCTGAAAAGACCATCGGGATGCTTAATTACTGGAATGCCTAATGGATACTCTAAGGTTATATGGGTGGAGCATGTAGAAGCAGAAGATAGTCATGTGGACCAGTATTTCCGGTCCCTATTCACCTCCACTGTAGCTTTTGGCGCAACCCGTTGGACTAATTCCTTAGTTCGATATGGTGAATGGTTACAAAGTCTATTCGCAACATCATTGGTTGCTGATGAAGGAGTTCTTATAGCCCAAACTGGGAGGACTAGTTTGCTGAAACTGGCAGATAGAATGATGAAAACATTTTGTAGAAATATGAGTTCTACCGCAGACAATCCATGGACTCAAATGGCTTATTCCCCATACGTCAGAATCATGGTGAAGAATAACATGGATGAACCTGGAAAGCCTCCAGGTACATCAGTGGTTTTCACTACTTCTGTTTGGCTCGATGTCTCCCCAAATCGACTGTTCAACTTCCTTCGGCATGAGAATTCCAGAACTAAGTGGGATTCGCTTTCACGTAGACATACTATTCGAGAATTCGCATCGATGCTGAAGGGCCAAAATCCAGGAAATCGTGTTTCCCTGATGAGAGCAAACAATTCAGAGGGGAAGCTTGTAATCTGTTTTGTGCAAGAGAGTTACACAGACTCAACAGGTTCGTACGTGGTGTATGCTCCACTAGACAAGGCAGCTGTGGCAGGTCTTATACACGGATCCAACCCTGACAAAGTGATGATCCTGCCATCAGGGTTTAGCATTCTTCCTGAAAGGTTGGAGGGAGATGAAGATAGAAGCACTCGAAGTCTTCTAACTATTGCCTTCCACATAGTTGAAAGTTGCACTACTAGGCCATATATCGCTCCTGAATCAGTCGAAACCATATACAAAGTCATTTCAGATACTGTTACCTCTATAACCGACTCAGTGCTCTATCATAATCATCGCAACAATTGTATGGATGATTCAAATTTCTAG 1113 0.4295 MSTELHLPAPVLLTRECYFGRYSKQLSYSTWGVVDVSLEKFLPSPTTNFLKRPSGCLITGMPNGYSKVIWVEHVEAEDSHVDQYFRSLFTSTVAFGATRWTNSLVRYGEWLQSLFATSLVADEGVLIAQTGRTSLLKLADRMMKTFCRNMSSTADNPWTQMAYSPYVRIMVKNNMDEPGKPPGTSVVFTTSVWLDVSPNRLFNFLRHENSRTKWDSLSRRHTIREFASMLKGQNPGNRVSLMRANNSEGKLVICFVQESYTDSTGSYVVYAPLDKAAVAGLIHGSNPDKVMILPSGFSILPERLEGDEDRSTRSLLTIAFHIVESCTTRPYIAPESVETIYKVISDTVTSITDSVLYHNHRNNCMDDSNF* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0964 370 Pfam START domain 2 107 IPR002913 GO:0008289
Pvu5g0964 370 SUPERFAMILY Bet v1-like 4 111 - -
Pvu5g0964 370 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 1 357 - -
Pvu5g0964 370 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 357 IPR042160 -
Pvu5g0964 370 ProSiteProfiles START domain profile. 1 113 IPR002913 GO:0008289
Pvu5g0964 370 SUPERFAMILY Bet v1-like 131 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0964 Pvu-Chr5 27672525 27674096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0964 1 355 Homeobox Transcription Factor Family AT4G04890 42.400 5.32e-95 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0964 K09338 - jre:108992281 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0964 5 27672525 27674096 Pvu7g0544 7 4294527 4299835 ECH
Pvu5g0964 5 27672525 27674096 Pvu2g0497 2 4498127 4507189 ECH
Pvu5g0964 5 27672525 27674096 Pvu5g0964 5 27672525 27674096 ECH