Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0963 ATGAGTATAGATCGAGCCAGTGACCTTCTTTTAGGATTTTCAATATACACTGAGCCAATAAGAACTGGAATCATTGAGCATGCATTTTGTGGCATGGATGAGTTGTCAAAGATAGGCATTGCAGGGCACCCTTTATGGCAGCGGGAGACAAACAATGGGTGTGAGATTCTAAATAATATTGAATATTTGAGGCAATTTGGTGAGGTTGATACCACCCTAAGGGAGATTGTTAAGTTGATGGAGGTTGGAGAGTCTCAAAATTTACCAAGCTTTGACACACATCAAACTGAGCTTCCAACATCAACTGTAACTCCCACTGTAACTCCACATACACAAACTGAAGGTTCAAGAGATATAGCATATATCAACATGGCCCCAATATGCATTGTTGAATTGCTCATGGATGTGAATCAATGGTCTGAAGTGTTTTACAATATTGTCTCCAAAGCAACGATCGTAGGAACTTTGGTAGGAACGGAGGGAAGCTATGATAACAAATTGCACGTGAACACTAGTCTGACATTCTTCATTCCAATGCTTGTCCGTGTGCTTAGCGGTTTTAGTCCCTTGTCAAAGACTTCTTCCATGCAGAATAAGGCATCAGTCAGAAATGCATAA 618 0.4061 MSIDRASDLLLGFSIYTEPIRTGIIEHAFCGMDELSKIGIAGHPLWQRETNNGCEILNNIEYLRQFGEVDTTLREIVKLMEVGESQNLPSFDTHQTELPTSTVTPTVTPHTQTEGSRDIAYINMAPICIVELLMDVNQWSEVFYNIVSKATIVGTLVGTEGSYDNKLHVNTSLTFFIPMLVRVLSGFSPLSKTSSMQNKASVRNA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0963 205 MobiDBLite consensus disorder prediction 90 112 - -
Pvu5g0963 205 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 4 178 - -
Pvu5g0963 205 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 4 178 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0963 Pvu-Chr5 27662709 27667694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0963 6 178 Homeobox Transcription Factor Family AT4G21750 32.022 1.87e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0963 K09338 - pvu:PHAVU_005G093100g 392.504