Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0959 ATGGCTACCATCATTTTAAGGTCAAATGAAGTGCCTCATGCCTTGGTCTTGTTCTGTGTCTTGTTCTCTGTCTTGCTGATGCTGCCCAACTGTGGTGCCTATGAATTTTTAGTTGGAGGCCAAAAGGGTTGGAGTCTCCCAAGTGACTCCAGTTCCAACCCTTATAATCAATGGGCACAAAAGAGCAGATTTCAAATAGGAGACTCCCTTGTGTTCAATTACCCTTCTGGAAAAGACTCAGTGATTGAAGTAAGTAGCCAAGACTATGGCAGTTGCAATACTGATGCATACAGTGAAAAATTCTCAGACGGTCACACAGTGATCAAGCTCAACCAATCAGGGCATCACTACTTCATCAGTGGAAACAAAAACAACTGTCTCAAAAATGAGAAACTGGAGGTGATTGTGCTGGCTGACAGGAACAACAAAAACACACACACCAACCAATCAACTCCTTCACCTTCTCCCTCTCAATTTACAACAGAATCATTAGCTCCATCCCCAGCACCTTCTCAGCAACAGGTTCCATCTCCAGTGGCAGCACCTCCTCAGCAAGAGGCTGCTTCTCCACCATCTCCACCCTCAAACCAAACTCCAGCTCCAGCTCCAGCTCCTGTCAGTGATCACCCTTCTCCTCCTTCTCCTCCTCACAATACTGCTTCCTCAGTCCGGGTCAGTTTTGCTGGTTCTGTTGGAGCATTATTCATGGCCTCAGTTCTGGTTTTTTCTTTCTAA 735 0.4599 MATIILRSNEVPHALVLFCVLFSVLLMLPNCGAYEFLVGGQKGWSLPSDSSSNPYNQWAQKSRFQIGDSLVFNYPSGKDSVIEVSSQDYGSCNTDAYSEKFSDGHTVIKLNQSGHHYFISGNKNNCLKNEKLEVIVLADRNNKNTHTNQSTPSPSPSQFTTESLAPSPAPSQQQVPSPVAAPPQQEAASPPSPPSNQTPAPAPAPVSDHPSPPSPPHNTASSVRVSFAGSVGALFMASVLVFSF* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0959 244 MobiDBLite consensus disorder prediction 171 217 - -
Pvu5g0959 244 MobiDBLite consensus disorder prediction 143 221 - -
Pvu5g0959 244 CDD OsENODL1_like 34 137 IPR041846 -
Pvu5g0959 244 Pfam Plastocyanin-like domain 49 128 IPR003245 GO:0009055
Pvu5g0959 244 Gene3D - 34 150 IPR008972 -
Pvu5g0959 244 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 18 243 - -
Pvu5g0959 244 MobiDBLite consensus disorder prediction 143 170 - -
Pvu5g0959 244 SUPERFAMILY Cupredoxins 33 137 IPR008972 -
Pvu5g0959 244 ProSiteProfiles Phytocyanin domain profile. 34 138 IPR003245 GO:0009055
Pvu5g0959 244 PANTHER BLUE COPPER PROTEIN 18 243 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0959 Pvu-Chr5 27498931 27500827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0959 21 174 Phytocyanin Superfamily AT3G20570 49.091 1.02e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0959 - - gmx:100788637 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0959 5 27498931 27500827 Pvu5g0959 5 27498931 27500827 ECH
Pvu11g1444 11 33235531 33236973 Pvu5g0959 5 27498931 27500827 PCT