Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0957 ATGGAAGAAACTACTAATTCAATAGCCTCCTCCTCCTACCCAACAAAAAAAACAAAAATAAAATTACTAGCAATCCATCTCTTCCTTTTCTTGAGCCTCCATGTCTCCCATGTCCAAGCGCAGAAAACACTATCGTCATCACCACCATCTGCGATCGAACTCGAGGGCTGCGATGGAGTTTTTCTCTCGTATGCCCTCGTGGCGAGGCAGAAGGAGTACCCGCACGTGAAGAACGCGTCGAAGCAGGCCTGGGCGTTCAAGGCGGAAGCCACGCTGACGAACGTGGGAGATGAGGAGCTGCAGGGGTGGAAGATGTTTGTGGGGTTCCAGCACCACGAGATTCTGGTCTCCGCAGACGGCGCCATTCTCATAGACGCCGGGGACTTTCCTGCGGATGTGGACAATGGGACGACGCTGGTGGGGTCCGCCGTGTCGGACTTGAAAACCGCCATTGAAACCGCCGGGGATCTGAACCAGATGAGTGCGAAGATCGATATTGTTGGGACACAGTTTGGTTTGGGTCCTGGAGCCACGCCCATGCCCAAAACCATTCATCTCGAGAATGATGGATTCAAATGCCCTACACCTACTCGTCGAGCCTCGAGAATGTTCGCATGTTGCAGAAAGGACCCGACAGTGAAGGCAAAGCTAGCGAAGAAAACTAAGTACCCTCCTCGTCGCTATGGAGATCTAACCATAGCATACGACGTGCTTCAAGCTTTCCAGAACAACTACTATGTCCAAGTGACAATGGAGAACAAACACCCTTTGGGCCGTCTTGATCATTGGAACTTGACATGGGAATGGCCAAAGGGAGAGTTCATATATTCCATTAAAGGAGCTTATGCTCGCAGAAAAGACCCTTCTGAGTGCTTATATGGTACAGCTGGAAAATTCTACGGTGACATGGATTTCTCACAAGTTGCAACCTGTCAGAAGAAGCCAATAATCTCTGACCTTCCAGCAGAAAGAAAAGAAGATGAAAAAGTTGGGAAACTCCCTTGGTGCTGCAGGAATGGTACCGTTTTGCCTCCACTGATGGACAAGAACAAAGCTAAATCAATGTTCCAGATGCAAGTGTTCAAAATGCCACCAGACACTGATAACAGAACGTCCATCACACCCCCTATGAGGTGGAACATCGATGGTGTTATCAATCCATATTACAAATGTGGTGCACCGGTTAGGGTTGACCCTGAGGTTTTCCCTGATCCCAGTGGACTAAGTGCAATCAGCACAGCTGTTGCAAGTTGGCAAATAGTTTGCAACATCACCAAACCCAAGCCTCAGCAGAATCGTTGCTGTGTCTCCTTCTCAGCATTCTACAACGAATCTGCAATCCCTTGCAACACGTGTGCATGTGGCTGTGATGACACAAGGAAGTGCAACTCCAGGGCCTCTCCATTGCTTCTTCCACCAGATGCTCTTCTTGTGCCGTTTGCAAACAGGACCCTGAAGGCAAAAGCATGGGCCAAAATGAAGCACTTGCACATGCCTAGCAGGCTCCCTTGTGCAGATAACTGCCCCGTCAGCATCAACTGGCACGTGAGTTCGGATCACAAGGATGGATGGACTGCTAGGATCACACTTTTCAACTGGGAGGATTACTCCTTTGAAGATTGGTTCACTGCAATTCAGTTGACCAAGACTTATGACGATTTTAAAGATGTTTATTCCTTCAACGGGACAAGAATTCCTGGTATCAAAACCATTTTCTTAGAAGGCCTCAAGGGTTTGAATTACTTGGCTGGAGAGATCAATGGAACACACGCTAAAGATCCAAGAGTGCCAGGGAAACAACAATCTGTGCTTTCTTTCAGCAAAAAGCACGTAAAACACTTTGATGTCACAAAAGATGCGTTCCCAGCTAAGGTTTTCTTCAATGGATTGGAGTGTTCACTTCCTCCTATTAGACCAGGAAAAAGCTCGGGGCATAAACCTTCCATCAGAATCATTGCACTCATACTCACAGCGTTTATGACACTCTTTCTGATCTAA 1998 0.4775 MEETTNSIASSSYPTKKTKIKLLAIHLFLFLSLHVSHVQAQKTLSSSPPSAIELEGCDGVFLSYALVARQKEYPHVKNASKQAWAFKAEATLTNVGDEELQGWKMFVGFQHHEILVSADGAILIDAGDFPADVDNGTTLVGSAVSDLKTAIETAGDLNQMSAKIDIVGTQFGLGPGATPMPKTIHLENDGFKCPTPTRRASRMFACCRKDPTVKAKLAKKTKYPPRRYGDLTIAYDVLQAFQNNYYVQVTMENKHPLGRLDHWNLTWEWPKGEFIYSIKGAYARRKDPSECLYGTAGKFYGDMDFSQVATCQKKPIISDLPAERKEDEKVGKLPWCCRNGTVLPPLMDKNKAKSMFQMQVFKMPPDTDNRTSITPPMRWNIDGVINPYYKCGAPVRVDPEVFPDPSGLSAISTAVASWQIVCNITKPKPQQNRCCVSFSAFYNESAIPCNTCACGCDDTRKCNSRASPLLLPPDALLVPFANRTLKAKAWAKMKHLHMPSRLPCADNCPVSINWHVSSDHKDGWTARITLFNWEDYSFEDWFTAIQLTKTYDDFKDVYSFNGTRIPGIKTIFLEGLKGLNYLAGEINGTHAKDPRVPGKQQSVLSFSKKHVKHFDVTKDAFPAKVFFNGLECSLPPIRPGKSSGHKPSIRIIALILTAFMTLFLI* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0957 665 PANTHER COBRA-LIKE PROTEIN 10 19 664 - -
Pvu5g0957 665 Pfam COBRA-like protein 245 425 IPR006918 GO:0010215|GO:0031225
Pvu5g0957 665 PANTHER COBRA-LIKE PROTEIN 7 19 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0957 Pvu-Chr5 27446250 27449786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0957 24 665 COBRA Gene Family AT3G20580 58.168 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0957 - - gmx:100789175 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0957 5 27446250 27449786 Pvu5g0957 5 27446250 27449786 ECH