Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0931 ATGGACTCACAACAGCTTTTCAGTTTTGGTGTTGCTAGTGCAGGATTACCTTACATGCCATCTTTTCCCACAATTCCATCCTTACCCAACAGGCTGCTTGGATCCTTGAAATATGACACTGGAAACTCACCTAATTCACCCTTTTCCACTTATTTTGATTCTGACACCCTTTCTGCGTTGAGTGACAGCCAGGAGCAATACAGCCCCAGAGAAAACCTCTCTGGTGTCAGCACTTCTTGTAACTCTTCACTGGAAACCAACCCTTACATGCATGGATCAATCTCATCTGTGGACTTCATAGACAATTTCCCACTATATTCTGCTAGGAACTCTCTTCCACAGAATGTGAATTGTAATCAGAAAATCCAACACGCTTTGCTGGAGTTAGAAACTGCTCTGATGGCCCCTGATGATGATCAAGTTACCACACCAAATACATTGTCTGAGAGCAGCAGACCAATGGCATCTGGCCAGAGAAACAGATCCTGGAGGCACGAGAACCATGGATCACAATATGCTCAGCCATCATATGTTCCCAGTAGTAGGTTGTCAAGTGAAGTTGTGCATGTAGAGAAACGGCAAAAGTTGATGGAGGAACCAGCACTACAAGCTTTCCCACCCAACAATTTGAAGCAATTGCTGATTGCATGTGCCAAAGCCCTACATGAAGACAAGGTGAAAGATTTTGATGAATTGGTAGGAAAGGCTAGAGATGCTGTGTCCATCAATGGGGAGCCAATCCAGCGGCTTGGCGCTTACATGGTAGAAGGGCTTGTTGCAAGGAAGCAAGCATCAGGGAAGAGCATCTATCATGCCCTTAGGTGCAGAGAGCCTGAAGGTGAAGAATTACTCTCTTACATGCATCTGCTGTTTGAGATTTGCCCCTACTTAAAATTTGGTTACATGGCTGCAAATGGAGCCATTGCGGAAGCCTGCAGAAACGAGGATCGCATACACATCATAGACTTCCAAATTGCTCAGGGATCTCAATGGATGACTCTTCTTCAAGCTCTTGCAGCAAGACCTGGTGGTGCTCCCCATGTTCGGATCACGGGGATTGATGATCCTGTTTCTAAATATGCACGTGGCGACGGATTAGAGATTGTGGGGAAAAGGTTGGCCTTGATGTCTAAGAAATTTGGCATACATGTTGAGTTTCATGGAGTGCCTGTTTTTGCTCCAGAAGTGACAAGGGAAATGCTAGATATCAGGCCTGGAGAGGCCTTGGCTGTGAACTTCCCCTTGCAGCTCCATCACACAGCTGATGAGAGTGTTCATGTGAGTAACCCAAGGGATGGACTATTGAGATTGGTAAAGTCACTTTCTCCCAAGGTGACTACACTGGTGGAACAGGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTATTGAAACCTTGGATTACTACTTGGCAATCTTCGAGTCTATTGATGCCAGCCTCCTCCCAAGAGATAGCAAGGAGCGGATCAATGTGGAGCAACATTGTCTGGCCAGGGATATAGTGAATATTATTGCTTGTGAAGGCAAGGAAAGGGTTGAGAGACATGAACTATTGGGCAAGTGGAAATCCAGGTTAACAATGGCTGGCTTCAGTCAGTGTCCTTTGAGCTCTTATGTGAATTCTGTCATAGGAATCCTTCTGAAGTGCTATTCAGAACATTATACTCTATTGGAGAAGGATGGAGCCATGTTGTTGGGGTGGAAGGACAGAAATTTGATATCAGCTTCAGCCTGGCATTGCTGA 1749 0.4545 MDSQQLFSFGVASAGLPYMPSFPTIPSLPNRLLGSLKYDTGNSPNSPFSTYFDSDTLSALSDSQEQYSPRENLSGVSTSCNSSLETNPYMHGSISSVDFIDNFPLYSARNSLPQNVNCNQKIQHALLELETALMAPDDDQVTTPNTLSESSRPMASGQRNRSWRHENHGSQYAQPSYVPSSRLSSEVVHVEKRQKLMEEPALQAFPPNNLKQLLIACAKALHEDKVKDFDELVGKARDAVSINGEPIQRLGAYMVEGLVARKQASGKSIYHALRCREPEGEELLSYMHLLFEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGSQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGDGLEIVGKRLALMSKKFGIHVEFHGVPVFAPEVTREMLDIRPGEALAVNFPLQLHHTADESVHVSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDASLLPRDSKERINVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFSQCPLSSYVNSVIGILLKCYSEHYTLLEKDGAMLLGWKDRNLISASAWHC* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0931 582 MobiDBLite consensus disorder prediction 138 158 - -
Pvu5g0931 582 Pfam GRAS domain family 210 580 IPR005202 -
Pvu5g0931 582 ProSiteProfiles GRAS family profile. 201 581 IPR005202 -
Pvu5g0931 582 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 581 IPR005202 -
Pvu5g0931 582 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 581 - -
Pvu5g0931 582 MobiDBLite consensus disorder prediction 138 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0931 Pvu-Chr5 25846525 25848273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0931 201 580 GRAS Transcription Factor Family AT1G50600 61.579 6.15e-169 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu5g0931 GRAS 1.1e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0931 - - gmx:100799073 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0931 5 25846525 25848273 Pvu5g0931 5 25846525 25848273 ECH
Pvu5g0931 5 25846525 25848273 Pvu11g1476 11 34129154 34132377 PCT