Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0921 ATGGGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCAACTGGAGGCAAGAAGAAGGCGTGGAGAAAGAAGAGAAAGTATGAGCTTGGGCGCCAATCAGCCAACACCAAGTTATCAAGCAACAAGACAATTAGGAGGATTCGTGTTAGAGGTGGCAATGTAAAATGGAGGGCACTGAGGTTGGACACTGGAAATTACTCATGGGGTAGTGAGGCAGTAACCCGCAAGACTCGTATTCTAGATGTTGTTTACAATGCCTCAAACAATGAGCTTGTGAGAACTCAGACGTTGGTCAAGAGTGCTATTGTTCAGGTTGACGCTGCTCCTTTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGCCGAAAAAAGAAAGCAGCATCCAAGAAGGACTCTACTGAGGAGGCTGATGCTGCTGCTGAAGAAACCAAGAAAAGTAACCATGTGCAGAGAAAACTTGAGAAGCGCCAGAAAGATCGCAAACTTGATGCCCACATTGAAGAACAATTTGCTGGTGGCAGATTGTTGGCATGTATTTCTTCTCGCCCTGGACAATGTGGCAGGGCTGATGGGTACATTCTGGAAGGGAAGGAGCTGGAGTTTTACATGAAGAAACTGCAGAAGAAGAAGGGAAAGGGTGCTGCTTAA 654 0.4664 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQSANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKAASKKDSTEEADAAAEETKKSNHVQRKLEKRQKDRKLDAHIEEQFAGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0921 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pvu5g0921 217 MobiDBLite consensus disorder prediction 1 26 - -
Pvu5g0921 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 - -
Pvu5g0921 217 MobiDBLite consensus disorder prediction 11 26 - -
Pvu5g0921 217 CDD Ribosomal_S8e_like 5 196 - -
Pvu5g0921 217 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pvu5g0921 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Pvu5g0921 217 Gene3D - 161 212 - -
Pvu5g0921 217 Gene3D - 32 160 - -
Pvu5g0921 217 MobiDBLite consensus disorder prediction 125 162 - -
Pvu5g0921 217 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0921 Pvu-Chr5 24498254 24500722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0921 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.415 5.23e-126 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0921 K02995 - gmx:100500112 382.489