Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0918 ATGTTGAGAATGAACACCAGCACTGGGAACCTTGTCCTCACACAGAATGGCAAAGTTGTTTGGTCTACAACCTCTTTGAGAAAAGCAGAAAGTCCAGTAGCCCTTCTCTTAGATTCTGGCAATCTAGTGGTAAGAGACGAGAAAGATGCAAACATTGAGGCCTACTTGTGGCAGAGTTTTGACTACCCCACTGACACTTTCTTACCAGAAATGAAGTTTGGTTGGGACTTGAGAACTGGTATCAATAGGAAGCTAACAGCTTGGAAGAGTCCTGATGATCCATCTCCTAGTGACTTCTCTTTTGGTATGGTGCTCCACACCTATCCTGAAGCATACATGATGAAGGGCAACCAAAAGTTCTACCGAAGTGGACCATGGAATGGCTTGCATTCAAGTGGTTCACCACATGTTAAGGCCAACCCCATTTATGACTTCAGGTTTGTTTTCAACGAAGCTGAAGTTTACTACACATATAGCCTTAAGAACTCCTCTGTGATCTCAAGGTTGGTGCTGAATGGAACAAGCTACGTTCGTAGGCGGTACGTATGGATTGAATCAACGCAAATATGGGAGGTGTACACTTCAGTGCCATTGGACTTATGTGACAGTTATTCCCTTTGTGGAGCTAATGCAAATTGTGTTATATCAGATTCACCTGTGTGCCAATGTTTGAAAGGGTTCAAGCCTAAGTCCCCTCAAGCATGGAGCTCAATGGATTGGTCTCATGGATGTGTCCGTAATAAGGAATTAAGCTGTGAGAACAAGCACATGGATGGATTTATCAAATTGCCTGAGATGAAAACGCCTGACACTACACATACTTGGCTGGATCAGACAATTGGGCTAGAGGAATGCAGAGCCAAGTGCTTGGATAACTGTTCTTGTATGGCTTATGCAAATTCAGATATCAGTGAAGGAACTGGTTGTGCCATGTGGTTTGGTGATCTAATTGATGTTAGACAGTTTTCAGATGGAGGCCAGGATCTATATGTTCGAATGGATGCTTCAGAATTAGAGCACACCAGTGAGAGCCACAAGAAGGGAGGAGTTTTGGTGGCAGTAACAGCTTCTTTGGCCGTGGCCACAGTTTCTGGTATTCTAATAGTACTTGGCTTGTGCTATAGAAAGAAATCACGCGCCAATGTGAAAGAGAGATCAGACTTCAGTATCAGATCATATCAAAACAGTGGAATCCAAGAGGCTGATATGGACCTACCAGTTTTTGACTTGTCAACTATAGCCAAAGCCACTAACAACTTTACAATCAAGAACAAAATTGGAGAAGGTGGTTTTGGATCTGTATACAGGGGAACTCTAGCAGATGGGCTGGAAATTGCTGTGAAGAGGCTTTCAGAAAGCTCAGGACAAGGATTGACCGAATTCAAGAACGAAGTAAAATTGATTGCAAAACTTCAACACCGCAATCTTGTAAAGCTTCTTGGATGTTGCCTTGAAGGAGAGGAAAAAATGTTGGTTTATGAGTACATGATAAATGGTAGCCTGAACTCATTTATTTTTGATCAGGAAAAAAGTGAGTTACTAGACTGGTCAAAGCGCTTCAACATTATGTGTGGAATTACTAAGGGCCTTCTCTACCTTCATCAGGATTCCAGGCTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATAATGAGTTAAACCCCAAAATTTCAGATTTTGGCATGGCTAGAATATTTGGTGGAGATCAGAAAGAAGGAAACACTAGGAGAATAGTTGGTACTTATGGCTACATGGCACCAGAATATGCAACTGATGGGCTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTTTATTGATGGAGATTATATCTGGGAAGAGAAGCAGAGGATATTATAATCAGAACCACAGCCAAAATCTCATAGGCCATGCATGGGATCTCTGGAAAAAAGGAAGACCACTAGAACTGGTTGATAAAAGCATAGAAAACTCCCTTTTTCAATCACAGATATTGCATTGCATTCATGTTAGTCTCTTGTGTGTTCAACAGAATCCAGATGATAGGCCTGGAATGTCTTGTGTGCTCTTAATGTTAGTGAGTGAAGTTGAATTGCCTGAGCCAAAACAGCCAGGATTCTTTGGAAAATATTCAGGTGAAGGGGACTCCTCCACAAGTAAGCAGCAAAAAAGTTCCACAAATGAAATAACCATTACCTTGTTAGAAGCCCGTTGA 2211 0.4147 MLRMNTSTGNLVLTQNGKVVWSTTSLRKAESPVALLLDSGNLVVRDEKDANIEAYLWQSFDYPTDTFLPEMKFGWDLRTGINRKLTAWKSPDDPSPSDFSFGMVLHTYPEAYMMKGNQKFYRSGPWNGLHSSGSPHVKANPIYDFRFVFNEAEVYYTYSLKNSSVISRLVLNGTSYVRRRYVWIESTQIWEVYTSVPLDLCDSYSLCGANANCVISDSPVCQCLKGFKPKSPQAWSSMDWSHGCVRNKELSCENKHMDGFIKLPEMKTPDTTHTWLDQTIGLEECRAKCLDNCSCMAYANSDISEGTGCAMWFGDLIDVRQFSDGGQDLYVRMDASELEHTSESHKKGGVLVAVTASLAVATVSGILIVLGLCYRKKSRANVKERSDFSIRSYQNSGIQEADMDLPVFDLSTIAKATNNFTIKNKIGEGGFGSVYRGTLADGLEIAVKRLSESSGQGLTEFKNEVKLIAKLQHRNLVKLLGCCLEGEEKMLVYEYMINGSLNSFIFDQEKSELLDWSKRFNIMCGITKGLLYLHQDSRLRIIHRDLKASNVLLDNELNPKISDFGMARIFGGDQKEGNTRRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLMEIISGKRSRGYYNQNHSQNLIGHAWDLWKKGRPLELVDKSIENSLFQSQILHCIHVSLLCVQQNPDDRPGMSCVLLMLVSEVELPEPKQPGFFGKYSGEGDSSTSKQQKSSTNEITITLLEAR* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0918 736 MobiDBLite consensus disorder prediction 703 736 - -
Pvu5g0918 736 ProSiteProfiles EGF-like domain profile. 197 233 IPR000742 -
Pvu5g0918 736 Pfam D-mannose binding lectin 6 89 IPR001480 -
Pvu5g0918 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Pvu5g0918 736 SMART ntp_6 255 333 IPR003609 -
Pvu5g0918 736 Gene3D Phosphorylase Kinase; domain 1 380 495 - -
Pvu5g0918 736 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 733 - -
Pvu5g0918 736 ProSitePatterns Protein kinases ATP-binding region signature. 426 448 IPR017441 GO:0005524
Pvu5g0918 736 Pfam PAN-like domain 252 319 IPR003609 -
Pvu5g0918 736 PIRSF SRK 1 736 IPR024171 GO:0004674
Pvu5g0918 736 Pfam S-locus glycoprotein domain 121 231 IPR000858 GO:0048544
Pvu5g0918 736 Gene3D - 1 78 IPR036426 -
Pvu5g0918 736 SUPERFAMILY Protein kinase-like (PK-like) 400 691 IPR011009 -
Pvu5g0918 736 ProSiteProfiles PAN/Apple domain profile. 252 334 IPR003609 -
Pvu5g0918 736 PANTHER - 6 733 - -
Pvu5g0918 736 SMART serkin_6 420 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0918 736 Gene3D Transferase(Phosphotransferase) domain 1 496 699 - -
Pvu5g0918 736 SUPERFAMILY alpha-D-mannose-specific plant lectins 6 94 IPR036426 -
Pvu5g0918 736 MobiDBLite consensus disorder prediction 711 736 - -
Pvu5g0918 736 Pfam Domain of unknown function (DUF3403) 694 736 IPR021820 GO:0004674
Pvu5g0918 736 ProSiteProfiles Protein kinase domain profile. 420 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0918 736 CDD STKc_IRAK 426 691 - -
Pvu5g0918 736 Pfam Protein tyrosine and serine/threonine kinase 421 686 IPR001245 GO:0004672|GO:0006468
Pvu5g0918 736 CDD PAN_AP_plant 250 332 - -
Pvu5g0918 736 ProSiteProfiles Bulb-type lectin domain profile. 1 57 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0918 Pvu-Chr5 24398811 24403186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0918 335 708 Receptor kinase-like Gene Family AT4G23190 50.914 7.29e-130 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0918 PK_Tyr_Ser-Thr 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0918 - - pvu:PHAVU_005G088800g 1469.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0918 5 24398811 24403186 Pvu11g1525 11 38136903 38141286 PCT