Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0917 ATGAAAATCCTTCTTCTCATGTTCGTTCTTACTAAGATTCTGTTTTTCTTCTTCCGCACCTCCACTGCAAATGACTCAATATCCCAATTTCAATCACTTTCCGTAGGCAACACCTTGGTTTCTGAGAAGGGTACTTTTGAATTGGGTTTCTTCAGTCCAGGAAGTGCTGCAGATCTTTACTTGGGGATATGGTACAAATCAATATCAGTGAAGACTGTTGTGTGGGTTGCCAACAGAGCCAAGCCAGTAAAAGGAAACTCTAACATGTTGCATATTAACAGTGAGGGGAATCTTGAGCTTGTTAACCATAATGGGGTTGTGTCTTGGTCAGCAAACTCTTCAAAGAAGGTTCAAAATCCCATTGTTCAGCTCTTAAATTCTGGGAATTTGGTAGTGAGAGATGAAGGAGACCAAGTACCTGAACGCTACTCGTGGCAAAGCTTTGATTACCCTTCTGACACACTTTTACCAGGAATGAAGCTGGGTTGGGACTTAAGAACCGGCCTCGAGCGGCGTGTATCTTCTTGGAAGAATTGGGATGATCCATCACCAGGAGATTTCAGTTGGGGTATCTCTCTCGAAGGATTTCCTCAAGTGATAATGTGGAAGGGGTCAAAGGAGTTTTACCGTGGTGGCCATTGGAATGGACTTGGATTCAGTGGTGCCCCAGAATTGAAGGCAAATCCAGTTTTTAACTTCAAGTTTGTTTCCAACGAGAATGAGGTGTACTACACCTACAGCCTCAGGAATGAGTCTATGATTTCAAGGATTGTAATGAACCAATCCATTTCTACTCGCCAAAGGTACATATGGATTGAAGATGCTCAAGCTTGGAGGCTTTATGCATCTGTACCTAGAGATAACTGTGATTCCTACAATATCTGTGGACCAAATGGAAATTGTGTAATTGGTGATTCTCCAGTGTGCCAGTGTTTAAGTGGATTTAAACCAAGATTGCCAGGGCACTGGGACATGATGGACTGGACTCAAGGATGTTTTCTTACTGAAGAATGGAGATGTGAGGAAAGGAGGAAACATGGGTTTGTTAAATTTAGTCAGCTGAAAGCTCCAGATACTTCAAATTCTTGGGTCAATGAGAGTATGAGTCTCACTGAGTGCAGGGATAAGTGCTTGGAGAATTGCTCCTGTAAAGCTTATGCAAATACAGATGTTGGAGGAGGAGGTAGTGGTTGTTTGATGTGGTTTGGTGATCTCAGGGATATCAGAGAGTTTTCTGGTGGTGGTAGCGATTTATATATCAGAACTAAATTTTCAGAATCAGCTGTGAAAGAAAAACATACCATGAAGGTGGTGGCAATAATCCTCATAATAGCCTCAGTTCTTACAACCATTCTGGTTTTGTACAATGTTGGAAAGAGAATAAAAAAGTTCAGAGCTTGTGAATCAAGTAAATCCTTGATACTAGAGAATAATAAAGATGAGGAAGAGCTTGAGCTTCCTTTCTTTGACCAAGCAGCAATCGCCAAAGCAACTAATTGCTTCTCAATTAACAATAAGCTTGGAGAAGGTGGATTTGGGGCAGTATATATGGGTACCTTAGCAGATGGACAAGAAATTGCTGTGAAGAGACTCTCACAAAGTTCTGGACAAGGGTTTAATGAATTTAAGAACGAAGTCATATTGATAGCCAAACTTCAGCATCGGAACCTAGTTAAGCTTGTTGGTTATTGCATTGAAGAAGAGGAGAAGATGCTTATCTATGAGTACATGCCCAACAAAAGCCTAGACTCCTTTATATTTGATCAGGCAAAGGCTAAAATTTTAGATTGGTCTAAACGCTTCAGTATTATTTGTGGAGTTGCACGAGGACTTTTTTATCTTCATCAAGATTCTAGATTGAGAATAATACATAGAGACCTTAAAGCAAGTAATGTCCTACTTGATCATGAGTTCAACCCAAAAATATCTGATTTTGGCATGGCTAGAACTTTTGGGGGAGATCAGATTGAAGGAAATACAAAAAGGGTGGTTGGAACATATGGTTACATGGCACCTGAATATGCCATTTATGGACTATTCTCAGTGAAATCTGATGTCTTCAGCTTTGGTGTACTAATGCTAGAGATAGTAAGTGGAAAGAAGAATAGAGGTTTTTCCCATTCAAATAACAGTATTAACCTTATTGGACAGGCATGGAGATTTTGGAAAGAAACCAGACCTTTGGACTTAATTGATTCATGCATGGAGAATTCATCTGTTCTATCAGAAGCATTGCGTTGTATCCATATCAGTCTTCTATGTGTCCAACAGCATCCTGAGGATAGGCCAAGTATGTCCACTGTGGTAGTGATGCTGAGCAGTGAGAGTGCCCTGCCTCAACCTAAGGAGCCCGGTTTCCTTATGGAGAAGGAGAAATGTTTTCTTGAAGCAGATTCCTCCACCAACCACCTCTTTTCTTCTACCAATGATATAAGTCTTACCACGTTTGAGCCTCGGTAG 2460 0.4077 MKILLLMFVLTKILFFFFRTSTANDSISQFQSLSVGNTLVSEKGTFELGFFSPGSAADLYLGIWYKSISVKTVVWVANRAKPVKGNSNMLHINSEGNLELVNHNGVVSWSANSSKKVQNPIVQLLNSGNLVVRDEGDQVPERYSWQSFDYPSDTLLPGMKLGWDLRTGLERRVSSWKNWDDPSPGDFSWGISLEGFPQVIMWKGSKEFYRGGHWNGLGFSGAPELKANPVFNFKFVSNENEVYYTYSLRNESMISRIVMNQSISTRQRYIWIEDAQAWRLYASVPRDNCDSYNICGPNGNCVIGDSPVCQCLSGFKPRLPGHWDMMDWTQGCFLTEEWRCEERRKHGFVKFSQLKAPDTSNSWVNESMSLTECRDKCLENCSCKAYANTDVGGGGSGCLMWFGDLRDIREFSGGGSDLYIRTKFSESAVKEKHTMKVVAIILIIASVLTTILVLYNVGKRIKKFRACESSKSLILENNKDEEELELPFFDQAAIAKATNCFSINNKLGEGGFGAVYMGTLADGQEIAVKRLSQSSGQGFNEFKNEVILIAKLQHRNLVKLVGYCIEEEEKMLIYEYMPNKSLDSFIFDQAKAKILDWSKRFSIICGVARGLFYLHQDSRLRIIHRDLKASNVLLDHEFNPKISDFGMARTFGGDQIEGNTKRVVGTYGYMAPEYAIYGLFSVKSDVFSFGVLMLEIVSGKKNRGFSHSNNSINLIGQAWRFWKETRPLDLIDSCMENSSVLSEALRCIHISLLCVQQHPEDRPSMSTVVVMLSSESALPQPKEPGFLMEKEKCFLEADSSTNHLFSSTNDISLTTFEPR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0917 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Pvu5g0917 819 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Pvu5g0917 819 Pfam Protein tyrosine and serine/threonine kinase 502 771 IPR001245 GO:0004672|GO:0006468
Pvu5g0917 819 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pvu5g0917 819 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Pvu5g0917 819 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Pvu5g0917 819 SMART ntp_6 343 422 IPR003609 -
Pvu5g0917 819 CDD EGF_CA 287 318 - -
Pvu5g0917 819 CDD STKc_IRAK 507 772 - -
Pvu5g0917 819 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0917 819 SUPERFAMILY Protein kinase-like (PK-like) 486 772 IPR011009 -
Pvu5g0917 819 PANTHER - 23 815 - -
Pvu5g0917 819 Pfam PAN-like domain 340 408 IPR003609 -
Pvu5g0917 819 Gene3D - 19 148 IPR036426 -
Pvu5g0917 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 815 - -
Pvu5g0917 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Pvu5g0917 819 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Pvu5g0917 819 Gene3D Transferase(Phosphotransferase) domain 1 577 783 - -
Pvu5g0917 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Pvu5g0917 819 SMART blect_4 30 151 IPR001480 -
Pvu5g0917 819 CDD B_lectin 31 151 IPR001480 -
Pvu5g0917 819 SMART serkin_6 501 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0917 819 Gene3D Phosphorylase Kinase; domain 1 475 576 - -
Pvu5g0917 819 CDD PAN_AP_plant 340 422 - -
Pvu5g0917 819 Pfam D-mannose binding lectin 72 177 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0917 Pvu-Chr5 24355969 24359850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0917 437 789 Receptor kinase-like Gene Family AT4G23230 55.337 9.39e-130 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0917 PK_Tyr_Ser-Thr 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0917 - - qsu:111985779 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0917 5 24355969 24359850 Pvu11g1526 11 38170069 38176211 PCT