Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0912 ATGGAAGGATTTACCTTGCTTCTGTTCTGCCTTGCCTTGCTGAATACTATAGCAGCTGCCACTGTGAGAGAAACTATTGATGTCTTGCAATCTATCCGTGAAGGCCAGATCATTGTTTCACCTGGCAAAACCTATGCACTTGGATTCTTCAGTCCAGGCAATTCCAAGAACCGTTATGTGGGAATTTGGTACAATGAGATCCCAACACAGACTGTAGTATGGGTTGCCAACAGAGACAACCCTCTTACTGACTCATCAGGGGTTTTGAAGCTCAGTGAAACTGGAGTTCTTGTTCTTCTCAACCATAACAAGACTGTCATCTGGTCTTCCAACACAACAGGTTCAGCACGACATCCGGTAGCAAAACTTTTGGATACTGGAAATCTCATTGTGCGGAATGGAAAGGGCAATGATGAGGAAAAGGATTTACTGTGGCAAAGTTTTGATTATCCAGGGGACACAATCTTGCCAGGACAGAAGTTTGGAAGAAATCTAGTTAAAGGTCTGAATCGATACATGTCATCATGGAATAGCTCTGAGGATCCATCTCATGGTGTATACAGTTATCAACTTGATATCACTGGATATCCGCAGTTTGTTTTGAGAAAAGGAACTTCCAAAAGATATCGTTTTGGATCATGGAATGGTATTCAGTTCAGTGGGGCACCTCTGTTGAAACAAAGTGAATTTACAAGATTTAGTTTTACTTCTAACAAGGAGGAGTTGTATTTTATGTTTGAGCGTACCAACAAGTCATTTTTACATAGGATGGTGTTAAACCAAGATGGTCGTATCCTGGGGAGTTATTGGGATGATGAACGAAAAATTTGGAACTTGCATGCACGAATTCCGGTTGATGACTGTGATTACTACGGCAAATGTGGAGCCTATGCTAGCTGCAACATAGACAATATCCCTCCATGTAAATGCTTGGATGGATTTGTGCCCAAAACGGCTGACCTTTATGGTAGTTGTGTCAGGAGAACTTCACTGAGTTGTCATGAAGACGGGTTTTTGCGGGTTTCAGGGTTGAAATTACCAGACACAGAGAAATCCTGGTTTGCCAGAAATACGAGCCTTGAGGATTGTAAAATATTGTGCATGAACAATTGCTCCTGTACAGCTTATGCAGCATTGGATGTGAGTAAAGGGCCCAATGGGTGTTTACTCTGGTTTAATGATCTGCTTGACATAAGAAAATTGACCGATGTTGATGAAGATATATACTTAAGGATGGCTAGGACAGAAGTAGAAGCTATTGAAGGAAAGCAATTGCATAAATCCAACATCCGGAAGCAAGAGACTCTTTTCATAAGTTCTGTGCTGTTTTTTGGAATTTTAGTACTATGTTTAACCTTCATCCTTTGTAGACGGTTGAAGACACGGCAGAAAGGAAAGATGGAAGGTAATCTAGAAAGAGATGTGACTGAAATAAATGAGCACGAGAGTAAAGATCTAGAGTTACCCATGTTTGAGTTGTCTACAATTACTTCTGCAACCAATAACTTTTCACCTGACAACAAACTAGGGGAAGGTGGCTTTGGATCAGTTTATAAGGGCATCCTAGCCGATGGAGGAGAAATAGCTGTGAAGAGGCTCTCTATGAATTCCAAACAAGGACTTCCAGAGTTCAAAAATGAAGTTATGCATATTGCAAAGCTTCAGCACAGGAATTTAGTGAGGATACTAGGGTACTGTCTTCAAGCAGGAGAAAGATTGCTTGTTTATGAATTTATGCCCAACAAAAGCTTGGATTACTTCATATTTGATGAAAACAAGAGCATGTTACTAGATTGGCCAAGGCGCATGGTGATTATCAATGGGGTTGCTCGGGGTCTTCTTTATCTTCATCAAGATTCAAGGCATAGAATAGTTCATAGAGATCTCAAAGCCGGGAATGTTTTGTTAGATAGTGAAATGAACCCAAAAATCTCGGACTTTGGACTGGCTAGAAGCTTTGGAGGAAATGAAATCGAAGCAACCACAAAACATGTAGTTGGAACCTATGGCTATCTGCCTCCAGAGTACATAATTGATGGAGCTTATTCAACAAAGTCAGATGTTTTCAGCTTTGGTGTGTTGATATTGGAGATAGTGAGTGGGAAGAGAAATAAAGGATTCTGTCATCAAGATAATCTACTGGCACATGTGTGGAGAGTGTTTACTGAAGGCAAATGTTCTGAAATAGTTGATGCAGCAATAACAGACTCACTCCATTTATCTGAAGCTCTAAGATCAATCCATGTAGGACTACTGTGTGTGCAACTATGTCCAGACGATAGGCCAAACATGTCATCAGTGGTTTTGATGCTGAGCAGCGAATCTGCAATGCCTCAGCCAAACTTGCCTGGATTCTTTACAAGTGCAAGTATGGTTGAAGATAGTTCTTCATCAAACAGTCATAAACAACACACAAATAATGACATGTCACTCAGCATAATGTCTGCTAGATAG 2454 0.4067 MEGFTLLLFCLALLNTIAAATVRETIDVLQSIREGQIIVSPGKTYALGFFSPGNSKNRYVGIWYNEIPTQTVVWVANRDNPLTDSSGVLKLSETGVLVLLNHNKTVIWSSNTTGSARHPVAKLLDTGNLIVRNGKGNDEEKDLLWQSFDYPGDTILPGQKFGRNLVKGLNRYMSSWNSSEDPSHGVYSYQLDITGYPQFVLRKGTSKRYRFGSWNGIQFSGAPLLKQSEFTRFSFTSNKEELYFMFERTNKSFLHRMVLNQDGRILGSYWDDERKIWNLHARIPVDDCDYYGKCGAYASCNIDNIPPCKCLDGFVPKTADLYGSCVRRTSLSCHEDGFLRVSGLKLPDTEKSWFARNTSLEDCKILCMNNCSCTAYAALDVSKGPNGCLLWFNDLLDIRKLTDVDEDIYLRMARTEVEAIEGKQLHKSNIRKQETLFISSVLFFGILVLCLTFILCRRLKTRQKGKMEGNLERDVTEINEHESKDLELPMFELSTITSATNNFSPDNKLGEGGFGSVYKGILADGGEIAVKRLSMNSKQGLPEFKNEVMHIAKLQHRNLVRILGYCLQAGERLLVYEFMPNKSLDYFIFDENKSMLLDWPRRMVIINGVARGLLYLHQDSRHRIVHRDLKAGNVLLDSEMNPKISDFGLARSFGGNEIEATTKHVVGTYGYLPPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNKGFCHQDNLLAHVWRVFTEGKCSEIVDAAITDSLHLSEALRSIHVGLLCVQLCPDDRPNMSSVVLMLSSESAMPQPNLPGFFTSASMVEDSSSSNSHKQHTNNDMSLSIMSAR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0912 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 182 IPR036426 -
Pvu5g0912 817 SUPERFAMILY Protein kinase-like (PK-like) 481 771 IPR011009 -
Pvu5g0912 817 SMART blect_4 29 151 IPR001480 -
Pvu5g0912 817 ProSiteProfiles Protein kinase domain profile. 503 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0912 817 SMART serkin_6 503 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0912 817 Gene3D Transferase(Phosphotransferase) domain 1 579 780 - -
Pvu5g0912 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Pvu5g0912 817 Pfam Domain of unknown function (DUF3403) 772 817 IPR021820 GO:0004674
Pvu5g0912 817 PANTHER - 11 814 - -
Pvu5g0912 817 Gene3D Hepatocyte Growth Factor 331 410 - -
Pvu5g0912 817 CDD PAN_AP_plant 329 413 - -
Pvu5g0912 817 PIRSF SRK 2 817 IPR024171 GO:0004674
Pvu5g0912 817 MobiDBLite consensus disorder prediction 793 817 - -
Pvu5g0912 817 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Pvu5g0912 817 SMART ntp_6 333 412 IPR003609 -
Pvu5g0912 817 Gene3D - 18 148 IPR036426 -
Pvu5g0912 817 ProSiteProfiles PAN/Apple domain profile. 333 413 IPR003609 -
Pvu5g0912 817 Gene3D Phosphorylase Kinase; domain 1 477 578 - -
Pvu5g0912 817 CDD B_lectin 30 151 IPR001480 -
Pvu5g0912 817 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Pvu5g0912 817 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 11 814 - -
Pvu5g0912 817 Pfam Protein kinase domain 506 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0912 817 CDD STKc_IRAK 509 771 - -
Pvu5g0912 817 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Pvu5g0912 817 Pfam PAN-like domain 333 398 IPR003609 -
Pvu5g0912 817 Pfam D-mannose binding lectin 71 176 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0912 Pvu-Chr5 24303686 24307623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0912 491 786 Receptor kinase-like Gene Family AT4G23290 58.472 1.15e-117 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0912 Pkinase 3.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0912 - - vun:114184694 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0912 5 24303686 24307623 Pvu11g1577 11 39856252 39859644 PCT
Pvu11g1561 11 39484380 39487942 Pvu5g0912 5 24303686 24307623 PCT