Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0911 ATGGAAGGCTTTACCTTGCTTCTGTTCGGCCTTGCCATGCTGAAAACTTTAGCAGCCGCTACTCTGAGAGACACTATTAATACCATGCAACCTGTCAATGATGGGCAGATCATAGTTTCAGCTGGAGAAGTCTTTGCATTAGGATTCTTCAGTCCAAGCAATTCAAAAAGCCGTTATCTTGGAATTTGGTACTACAAAATCCCAATACAAACTGTAGTATGGATTGCCAACAGAGACAACCCTCTTACTGACTCATCAGGGGTTTTGAAGCTCAATGAAACTGGACTTCTAGTCCTTCTCAACCATAACAAGAGTGTCATCTGGTCTTCCAGCACAACAAGGTCAGCACATTATCCTATTGGAAAGCTTTTGGATTCTGGAAATTTCATCGTGCAGGATGGAAACAACAATAATGACCCAAAAGATTTTCTGTGGCAAAGAAGAAATTTAATTACGGGCCTCAATCGATATCTATCATCATGGAATAGCTCTGATGATCCGTCCCGAGGTAAATACAGTCATCAAATTGATACTGCTGGATATCCACAATTTGTTATGAGAGAAGGCACAGTCAAGAGATTTCGGTTTGGATCTTGGAATGGTATTCAGTTTAGTGGGGCGCCTCAGGTCAAACAGAATAGTATATTTAGATTCAATTTTGTCTCTAATGAGGAAGAGATATATGTTAAATATGATCTTATCAACAAGTCAGTTCTGCATAGGTTGGTATTAGCAACGGATGGATTTCTTACTGGCATTAGTTGGAGTGATGAAGAAAATGTATGGAGAGAGTTTGCAATAGTTCCTGTGGATGACTGCGATTACTATGAAAAATGTGGAGCACATGCTAGGTGTAATATAAACAATTTCCCTCCATGTAATTGCTTGGAAGGATTTGTGCACAGTAGGCAATATACAAATGGTGGTTGTGTGAGGAGAACTTCACTGAGTTGCTATGGAGATGGATTTTTAAAGTTTTCAGGGTTAAAATTACCTGACACAGAGAGGTCCTGGTTTGATAGAAGCATTAGCCTTGAGGATTGCAGGATCTTGTGCATGAAGAATTGCTCATGTACAGCTTATTCAACCTTGGATATCAGTAAAGAATCGACTGGGTGTTTAGTCTGGTTTAACGATCTGATTGACATAAAAGAATTCACTGAATCTGATCAAGATATATACATAAGGATGGCAGGGACAGAAGTAGAAGCTATTCAAAGTATGCAATCACATAAATCCAACAGTAGGAAACAAAAGACTATTATCATAAGCTGTGTGTTGTCTATTGGAATTTTACTCCTATGCTTAACCTTCATCATTCATAGACAGTGGAGGACATGGCAGAAAGGCAGAAAAATGAAAAACGATCTAGAAGAAGATGCAAGTGTAATGAATGAGCAGGGGAACGAAGATGTAGAGTTACCAATGTTTGATTTGTCAACAATTAGGTCTGCGACGAAAAACTTTTCACTTGACAATAAACTAGGGGAAGGTGGTTTTGGATCTGTTTATAAGGGCATCCTGGAGGATGGAAGAGAAATAGCTGTCAAGAGAGACTCGAAGAACTCAAGCCAGGGACTTCGGGAGTTCAAAAATGAAGTTATGCATATTGCAAAACTTCAGCATAGGAATTTAGTGAGGCTACTGGGGTACTGCATTCAATCAGGAGAAAGATTGCTTGTTTATGAATTTATGGCAAACAAAAGCTTGGATTCCATCATATTTGATGAAAAGAAGAGCGTATTACTAGATTGGCCAAGGCGCTTGCACATTGTCAATGGGATTGCTAGAGGGCTTCTGTATCTTCATGAAGATTCAAGGCATAGAATAGTTCACAGAGATCTCAAAGCTGGGAATGTCTTTGGCTATATGCCGCCAGAGTATATAATTGATGGAGCTTATTCAACAAAGTCGGATGTTTTCAGCTTTGGTGTGTTGATACTGGAGATAGTGAGTGGGAAGAGAAATAGAGGATTCGGTAATCAAGATAATCTTCTGGCACATGCATGGAGACTATTTACTGAAGGCAAAAGCACTGAAATAGTTGATGCAACAATAAGAGACTCACTCAATCTATCTGCAGCTGTCAGATTAATTCATGTGGGGCTACTTTGTGTGCAACTATGTCCAGATGACAGACCAAGCATGTCCTCTGTGGTTCTGATGCTGAGCAGTGAATCTACGTTGCCTCAGCCAAAATTGCCTGGACTTTTTACAACCAGGAACCTGGTTGGGGACAGTTCTTCATCAGGCAGTTATAAGCAATACTCAAATAATAACATGACAGTTAGCACAATGTCTGCGAGATAG 2310 0.3983 MEGFTLLLFGLAMLKTLAAATLRDTINTMQPVNDGQIIVSAGEVFALGFFSPSNSKSRYLGIWYYKIPIQTVVWIANRDNPLTDSSGVLKLNETGLLVLLNHNKSVIWSSSTTRSAHYPIGKLLDSGNFIVQDGNNNNDPKDFLWQRRNLITGLNRYLSSWNSSDDPSRGKYSHQIDTAGYPQFVMREGTVKRFRFGSWNGIQFSGAPQVKQNSIFRFNFVSNEEEIYVKYDLINKSVLHRLVLATDGFLTGISWSDEENVWREFAIVPVDDCDYYEKCGAHARCNINNFPPCNCLEGFVHSRQYTNGGCVRRTSLSCYGDGFLKFSGLKLPDTERSWFDRSISLEDCRILCMKNCSCTAYSTLDISKESTGCLVWFNDLIDIKEFTESDQDIYIRMAGTEVEAIQSMQSHKSNSRKQKTIIISCVLSIGILLLCLTFIIHRQWRTWQKGRKMKNDLEEDASVMNEQGNEDVELPMFDLSTIRSATKNFSLDNKLGEGGFGSVYKGILEDGREIAVKRDSKNSSQGLREFKNEVMHIAKLQHRNLVRLLGYCIQSGERLLVYEFMANKSLDSIIFDEKKSVLLDWPRRLHIVNGIARGLLYLHEDSRHRIVHRDLKAGNVFGYMPPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNRGFGNQDNLLAHAWRLFTEGKSTEIVDATIRDSLNLSAAVRLIHVGLLCVQLCPDDRPSMSSVVLMLSSESTLPQPKLPGLFTTRNLVGDSSSSGSYKQYSNNNMTVSTMSAR* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0911 769 SMART ntp_6 318 397 IPR003609 -
Pvu5g0911 769 ProSiteProfiles Protein kinase domain profile. 489 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0911 769 Gene3D Phosphorylase Kinase; domain 1 463 564 - -
Pvu5g0911 769 CDD PAN_AP_plant 314 398 - -
Pvu5g0911 769 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 199 IPR036426 -
Pvu5g0911 769 SMART serkin_6 489 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0911 769 Gene3D Transferase(Phosphotransferase) domain 1 565 620 - -
Pvu5g0911 769 Gene3D Transferase(Phosphotransferase) domain 1 621 731 - -
Pvu5g0911 769 SMART blect_4 29 156 IPR001480 -
Pvu5g0911 769 SUPERFAMILY Protein kinase-like (PK-like) 471 737 IPR011009 -
Pvu5g0911 769 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Pvu5g0911 769 Gene3D Hepatocyte Growth Factor 317 396 - -
Pvu5g0911 769 Pfam Domain of unknown function (DUF3403) 724 769 IPR021820 GO:0004674
Pvu5g0911 769 ProSiteProfiles PAN/Apple domain profile. 318 398 IPR003609 -
Pvu5g0911 769 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 620 766 - -
Pvu5g0911 769 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 620 - -
Pvu5g0911 769 Pfam D-mannose binding lectin 71 147 IPR001480 -
Pvu5g0911 769 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Pvu5g0911 769 Pfam S-locus glycoprotein domain 194 301 IPR000858 GO:0048544
Pvu5g0911 769 Pfam Protein tyrosine and serine/threonine kinase 623 721 IPR001245 GO:0004672|GO:0006468
Pvu5g0911 769 Pfam Protein tyrosine and serine/threonine kinase 490 621 IPR001245 GO:0004672|GO:0006468
Pvu5g0911 769 Gene3D - 18 149 IPR036426 -
Pvu5g0911 769 PANTHER - 12 620 - -
Pvu5g0911 769 PANTHER - 620 766 - -
Pvu5g0911 769 CDD B_lectin 29 146 IPR001480 -
Pvu5g0911 769 PIRSF SRK 620 769 IPR024171 GO:0004674
Pvu5g0911 769 PIRSF SRK 2 621 IPR024171 GO:0004674
Pvu5g0911 769 Pfam PAN-like domain 319 383 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0911 Pvu-Chr5 24207273 24211263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0911 421 753 Receptor kinase-like Gene Family AT4G23190 43.767 4.38e-95 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0911 PK_Tyr_Ser-Thr 3.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0911 - - gmx:100795006 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0911 5 24207273 24211263 Pvu11g1579 11 39893899 39897526 PCT