Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0910 ATGGAAAGCTTAAAGGCTTTGGTTTTGTGGTCTCTTCTGTTGCATTTCATACCAGGCTTCAGCACCCTTGAAACCATTGCTCCAGGCCAATCAGTGAAGGATAATGAGACTCTAGTTTCAGCAGAAGGGACTTTTGAAGCAGGGTTCTTCGACTTTGGAGATCATAGTGGCAAATACTTTGGTATATGGTACAAGGATATTTCTCCAAGAACAGTTGTATGGATAGCCAATAGAGATACTCCAGTTGGAAACTCCTCAGGAGTTTTGAATGTAACTGATGGGGGAAATCTTATTATTTTGAATGGTTCAGGGGCCATAGTCTGGTCTTCCAATACATCAGCAGCTGCAAAGAAGCCTATTGTGCAGCTTTTGGAGACTGGAAACCTTGTTGTGAAAGAAGAAAGCAACCAAGAGAATCTTCTATGGCAGAGTTTTGATCTTCCTGGGGACACTTTGTTGCCAGGGATGAGACTTCGAAGTAGCATGGTAAATGGTAGTTTTACATCTCTGACATCTTGGAGAGACACAGAAGATCCTGGTAGAGGTGTGTATTCATATCACATAGATACTCGTGGGTTTCCTCAAGTGGTGATTACCAAGGGAGGCATATTGTTATACAGACCAGGTTCATGGAATGGCAATATTTTATCTGGGATCCCTTCTGAAACGTTGTACAAAATCTTTAATTTCTCTTTTGTTATAACTGAGAAAGAAGTTTCTTATGGATATGAACTACTGAACAAGTCAATTGTTTCTAGATACATGATCACGTTATCTGGTCAAATACAACGTTTCGTTTTGTCTGATTTGACAAATAGTTGGCAGCTTTTCTACTCTGGCCCCGGAGACCAGTGTGATAATTATGCCGTTTGTGGTGTGAATTCTAATTGTGATGTAAATAGATCTCCAACATGTGAGTGCCTTCAGGGTTTCATTCCCAGATCTCAAGAAAAATGGAATGCACAAAACTGGTCTGATGGGTGTGTTGGGAGAGTTAATTTAGATTGTGCCAATAGTGATGGATTTCTGAAGTATCAGGGAATGAAGTTGCCGGATACATCAACCTCATGGTTTGACAGAAGCATGAACCTTGAGGAATGTAAGAATTTCTGTCTGAAAAACTGTTCCTGTACAGCTTTTGCAAATTTAGATATCAGAGATGGTGGAAGTGGATGCTTGCTTTGGTTTAATAACATTGTGGATGTGAGAAAACTAACCACTGGAGGACAAGATCTTTTCATAAGAGTGGCAGCTTCAGATCTAGGTCATAAAAAAGGCTTAAACAAGAAGCAGCTCGCAGGAATTCTTGTAGGTTGTACTGTATTTATTGTTGTCATGATATTATTGGGAGTTACACTTCGGAGGAAAAAGCTTGAGAAGCCAGGTAGCTGGAAGAATCACACTGATAAGACACAGAAGGAAGACATTGACATTCCAATATTTGATTTTTCAACCATAGCTAATGCAACCAATGACTTTTGCATTACTCATAAATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTACTTTGGCAAATGGCCAAGATATAGCTGTGAAGCGGCTTTGCAATACTTCAGGACAAGGACCAAAGGAATTCATAAACGAAGTTGTGCTAATTGCTAATCTTCAGCACCGAAACCTTGTGAAGCTTCTTGGGTGTTGCATTCAAGATGATGAGAGGATCTTGATATATGAATTCATGACTAACAGAAGCTTGAACTACTTTATTTTTGATGAAGCTAGAAAAAGTTTGCTGGATTGGGCTCAGCGCTTCCAAATTATTTGTGGAATTGCCCGAGGACTTCTCTATCTTCATGAAGATTCTAGATTAAGAATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTAGACGAAAATATGAATTCAAAAATATCAGACTTTGGTCTCGCTACAACATTTGGAGGAGATGAAGTTGAAGGCAAAACAAAGAGAATAGTGGGAACTTATGGTTATATTTCTCCAGAATATGCAGCCCGTGGAAATTTCTCAGTGAAATCTGATGTCTTCAGTTTTGGTGTTATATTACTAGAGATAGTTTGTGGAAAAAAGAATAGGGAATATTTTGACCATCTTGATCATGACCTTCTTGGACATGCATGGAGACTTTGGTGTGAAGAAAAACCAATGGATTTGATAGATGAATCACTACGCGATTCAATAGCTCTTGCTGAAGCTAATGTATTGAGATGTATTCACATTGGGCTTCTATGTGTACAAGACAGAGCAGAGGATAGACCAGACATGTCATTAATAGTTCTAATGCTGAATGGTGAGAAACCACTGCCTAGGCCAAGGGAACCTGCTTTTTATCCCCATCAATCTGGCTCTTCATCAGGAAATAGTAAACTGCAATCAACCAATGGTATTTCTATCTCATTGTTGGAGGCAAGATAG 2424 0.394 MESLKALVLWSLLLHFIPGFSTLETIAPGQSVKDNETLVSAEGTFEAGFFDFGDHSGKYFGIWYKDISPRTVVWIANRDTPVGNSSGVLNVTDGGNLIILNGSGAIVWSSNTSAAAKKPIVQLLETGNLVVKEESNQENLLWQSFDLPGDTLLPGMRLRSSMVNGSFTSLTSWRDTEDPGRGVYSYHIDTRGFPQVVITKGGILLYRPGSWNGNILSGIPSETLYKIFNFSFVITEKEVSYGYELLNKSIVSRYMITLSGQIQRFVLSDLTNSWQLFYSGPGDQCDNYAVCGVNSNCDVNRSPTCECLQGFIPRSQEKWNAQNWSDGCVGRVNLDCANSDGFLKYQGMKLPDTSTSWFDRSMNLEECKNFCLKNCSCTAFANLDIRDGGSGCLLWFNNIVDVRKLTTGGQDLFIRVAASDLGHKKGLNKKQLAGILVGCTVFIVVMILLGVTLRRKKLEKPGSWKNHTDKTQKEDIDIPIFDFSTIANATNDFCITHKLGEGGFGPVYKGTLANGQDIAVKRLCNTSGQGPKEFINEVVLIANLQHRNLVKLLGCCIQDDERILIYEFMTNRSLNYFIFDEARKSLLDWAQRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNSKISDFGLATTFGGDEVEGKTKRIVGTYGYISPEYAARGNFSVKSDVFSFGVILLEIVCGKKNREYFDHLDHDLLGHAWRLWCEEKPMDLIDESLRDSIALAEANVLRCIHIGLLCVQDRAEDRPDMSLIVLMLNGEKPLPRPREPAFYPHQSGSSSGNSKLQSTNGISISLLEAR* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0910 807 Gene3D Transferase(Phosphotransferase) domain 1 569 771 - -
Pvu5g0910 807 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Pvu5g0910 807 SUPERFAMILY Protein kinase-like (PK-like) 477 765 IPR011009 -
Pvu5g0910 807 CDD PAN_AP_plant 332 417 - -
Pvu5g0910 807 Gene3D Hepatocyte Growth Factor 333 414 - -
Pvu5g0910 807 MobiDBLite consensus disorder prediction 774 794 - -
Pvu5g0910 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 179 IPR036426 -
Pvu5g0910 807 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Pvu5g0910 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Pvu5g0910 807 Pfam Protein tyrosine and serine/threonine kinase 495 761 IPR001245 GO:0004672|GO:0006468
Pvu5g0910 807 Pfam PAN-like domain 336 402 IPR003609 -
Pvu5g0910 807 SMART serkin_6 493 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0910 807 CDD B_lectin 30 148 IPR001480 -
Pvu5g0910 807 Gene3D - 21 145 IPR036426 -
Pvu5g0910 807 Pfam S-locus glycoprotein domain 206 314 IPR000858 GO:0048544
Pvu5g0910 807 SMART blect_4 29 148 IPR001480 -
Pvu5g0910 807 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 807 - -
Pvu5g0910 807 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 807 - -
Pvu5g0910 807 CDD STKc_IRAK 499 767 - -
Pvu5g0910 807 Gene3D Phosphorylase Kinase; domain 1 466 568 - -
Pvu5g0910 807 ProSiteProfiles Protein kinase domain profile. 493 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0910 807 SMART ntp_6 337 416 IPR003609 -
Pvu5g0910 807 PIRSF SRK 1 807 IPR024171 GO:0004674
Pvu5g0910 807 Pfam D-mannose binding lectin 71 174 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0910 Pvu-Chr5 24200166 24203696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0910 425 782 Receptor kinase-like Gene Family AT4G23190 51.233 2.14e-122 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0910 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0910 - - ccaj:109805721 1373.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0910 5 24200166 24203696 Pvu11g1581 11 39932310 39935581 PCT
Pvu11g1566 11 39603327 39606811 Pvu5g0910 5 24200166 24203696 PCT