Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu5g0910 | ATGGAAAGCTTAAAGGCTTTGGTTTTGTGGTCTCTTCTGTTGCATTTCATACCAGGCTTCAGCACCCTTGAAACCATTGCTCCAGGCCAATCAGTGAAGGATAATGAGACTCTAGTTTCAGCAGAAGGGACTTTTGAAGCAGGGTTCTTCGACTTTGGAGATCATAGTGGCAAATACTTTGGTATATGGTACAAGGATATTTCTCCAAGAACAGTTGTATGGATAGCCAATAGAGATACTCCAGTTGGAAACTCCTCAGGAGTTTTGAATGTAACTGATGGGGGAAATCTTATTATTTTGAATGGTTCAGGGGCCATAGTCTGGTCTTCCAATACATCAGCAGCTGCAAAGAAGCCTATTGTGCAGCTTTTGGAGACTGGAAACCTTGTTGTGAAAGAAGAAAGCAACCAAGAGAATCTTCTATGGCAGAGTTTTGATCTTCCTGGGGACACTTTGTTGCCAGGGATGAGACTTCGAAGTAGCATGGTAAATGGTAGTTTTACATCTCTGACATCTTGGAGAGACACAGAAGATCCTGGTAGAGGTGTGTATTCATATCACATAGATACTCGTGGGTTTCCTCAAGTGGTGATTACCAAGGGAGGCATATTGTTATACAGACCAGGTTCATGGAATGGCAATATTTTATCTGGGATCCCTTCTGAAACGTTGTACAAAATCTTTAATTTCTCTTTTGTTATAACTGAGAAAGAAGTTTCTTATGGATATGAACTACTGAACAAGTCAATTGTTTCTAGATACATGATCACGTTATCTGGTCAAATACAACGTTTCGTTTTGTCTGATTTGACAAATAGTTGGCAGCTTTTCTACTCTGGCCCCGGAGACCAGTGTGATAATTATGCCGTTTGTGGTGTGAATTCTAATTGTGATGTAAATAGATCTCCAACATGTGAGTGCCTTCAGGGTTTCATTCCCAGATCTCAAGAAAAATGGAATGCACAAAACTGGTCTGATGGGTGTGTTGGGAGAGTTAATTTAGATTGTGCCAATAGTGATGGATTTCTGAAGTATCAGGGAATGAAGTTGCCGGATACATCAACCTCATGGTTTGACAGAAGCATGAACCTTGAGGAATGTAAGAATTTCTGTCTGAAAAACTGTTCCTGTACAGCTTTTGCAAATTTAGATATCAGAGATGGTGGAAGTGGATGCTTGCTTTGGTTTAATAACATTGTGGATGTGAGAAAACTAACCACTGGAGGACAAGATCTTTTCATAAGAGTGGCAGCTTCAGATCTAGGTCATAAAAAAGGCTTAAACAAGAAGCAGCTCGCAGGAATTCTTGTAGGTTGTACTGTATTTATTGTTGTCATGATATTATTGGGAGTTACACTTCGGAGGAAAAAGCTTGAGAAGCCAGGTAGCTGGAAGAATCACACTGATAAGACACAGAAGGAAGACATTGACATTCCAATATTTGATTTTTCAACCATAGCTAATGCAACCAATGACTTTTGCATTACTCATAAATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTACTTTGGCAAATGGCCAAGATATAGCTGTGAAGCGGCTTTGCAATACTTCAGGACAAGGACCAAAGGAATTCATAAACGAAGTTGTGCTAATTGCTAATCTTCAGCACCGAAACCTTGTGAAGCTTCTTGGGTGTTGCATTCAAGATGATGAGAGGATCTTGATATATGAATTCATGACTAACAGAAGCTTGAACTACTTTATTTTTGATGAAGCTAGAAAAAGTTTGCTGGATTGGGCTCAGCGCTTCCAAATTATTTGTGGAATTGCCCGAGGACTTCTCTATCTTCATGAAGATTCTAGATTAAGAATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTAGACGAAAATATGAATTCAAAAATATCAGACTTTGGTCTCGCTACAACATTTGGAGGAGATGAAGTTGAAGGCAAAACAAAGAGAATAGTGGGAACTTATGGTTATATTTCTCCAGAATATGCAGCCCGTGGAAATTTCTCAGTGAAATCTGATGTCTTCAGTTTTGGTGTTATATTACTAGAGATAGTTTGTGGAAAAAAGAATAGGGAATATTTTGACCATCTTGATCATGACCTTCTTGGACATGCATGGAGACTTTGGTGTGAAGAAAAACCAATGGATTTGATAGATGAATCACTACGCGATTCAATAGCTCTTGCTGAAGCTAATGTATTGAGATGTATTCACATTGGGCTTCTATGTGTACAAGACAGAGCAGAGGATAGACCAGACATGTCATTAATAGTTCTAATGCTGAATGGTGAGAAACCACTGCCTAGGCCAAGGGAACCTGCTTTTTATCCCCATCAATCTGGCTCTTCATCAGGAAATAGTAAACTGCAATCAACCAATGGTATTTCTATCTCATTGTTGGAGGCAAGATAG | 2424 | 0.394 | MESLKALVLWSLLLHFIPGFSTLETIAPGQSVKDNETLVSAEGTFEAGFFDFGDHSGKYFGIWYKDISPRTVVWIANRDTPVGNSSGVLNVTDGGNLIILNGSGAIVWSSNTSAAAKKPIVQLLETGNLVVKEESNQENLLWQSFDLPGDTLLPGMRLRSSMVNGSFTSLTSWRDTEDPGRGVYSYHIDTRGFPQVVITKGGILLYRPGSWNGNILSGIPSETLYKIFNFSFVITEKEVSYGYELLNKSIVSRYMITLSGQIQRFVLSDLTNSWQLFYSGPGDQCDNYAVCGVNSNCDVNRSPTCECLQGFIPRSQEKWNAQNWSDGCVGRVNLDCANSDGFLKYQGMKLPDTSTSWFDRSMNLEECKNFCLKNCSCTAFANLDIRDGGSGCLLWFNNIVDVRKLTTGGQDLFIRVAASDLGHKKGLNKKQLAGILVGCTVFIVVMILLGVTLRRKKLEKPGSWKNHTDKTQKEDIDIPIFDFSTIANATNDFCITHKLGEGGFGPVYKGTLANGQDIAVKRLCNTSGQGPKEFINEVVLIANLQHRNLVKLLGCCIQDDERILIYEFMTNRSLNYFIFDEARKSLLDWAQRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNSKISDFGLATTFGGDEVEGKTKRIVGTYGYISPEYAARGNFSVKSDVFSFGVILLEIVCGKKNREYFDHLDHDLLGHAWRLWCEEKPMDLIDESLRDSIALAEANVLRCIHIGLLCVQDRAEDRPDMSLIVLMLNGEKPLPRPREPAFYPHQSGSSSGNSKLQSTNGISISLLEAR* | 808 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu5g0910 | 807 | Gene3D | Transferase(Phosphotransferase) domain 1 | 569 | 771 | - | - | |
Pvu5g0910 | 807 | ProSiteProfiles | PAN/Apple domain profile. | 336 | 417 | IPR003609 | - | |
Pvu5g0910 | 807 | SUPERFAMILY | Protein kinase-like (PK-like) | 477 | 765 | IPR011009 | - | |
Pvu5g0910 | 807 | CDD | PAN_AP_plant | 332 | 417 | - | - | |
Pvu5g0910 | 807 | Gene3D | Hepatocyte Growth Factor | 333 | 414 | - | - | |
Pvu5g0910 | 807 | MobiDBLite | consensus disorder prediction | 774 | 794 | - | - | |
Pvu5g0910 | 807 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 72 | 179 | IPR036426 | - | |
Pvu5g0910 | 807 | ProSiteProfiles | Bulb-type lectin domain profile. | 23 | 144 | IPR001480 | - | |
Pvu5g0910 | 807 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 614 | 626 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu5g0910 | 807 | Pfam | Protein tyrosine and serine/threonine kinase | 495 | 761 | IPR001245 | GO:0004672|GO:0006468 | |
Pvu5g0910 | 807 | Pfam | PAN-like domain | 336 | 402 | IPR003609 | - | |
Pvu5g0910 | 807 | SMART | serkin_6 | 493 | 741 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu5g0910 | 807 | CDD | B_lectin | 30 | 148 | IPR001480 | - | |
Pvu5g0910 | 807 | Gene3D | - | 21 | 145 | IPR036426 | - | |
Pvu5g0910 | 807 | Pfam | S-locus glycoprotein domain | 206 | 314 | IPR000858 | GO:0048544 | |
Pvu5g0910 | 807 | SMART | blect_4 | 29 | 148 | IPR001480 | - | |
Pvu5g0910 | 807 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 14 | 807 | - | - | |
Pvu5g0910 | 807 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 14 | 807 | - | - | |
Pvu5g0910 | 807 | CDD | STKc_IRAK | 499 | 767 | - | - | |
Pvu5g0910 | 807 | Gene3D | Phosphorylase Kinase; domain 1 | 466 | 568 | - | - | |
Pvu5g0910 | 807 | ProSiteProfiles | Protein kinase domain profile. | 493 | 779 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu5g0910 | 807 | SMART | ntp_6 | 337 | 416 | IPR003609 | - | |
Pvu5g0910 | 807 | PIRSF | SRK | 1 | 807 | IPR024171 | GO:0004674 | |
Pvu5g0910 | 807 | Pfam | D-mannose binding lectin | 71 | 174 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu5g0910 | Pvu-Chr5 | 24200166 | 24203696 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu5g0910 | 425 | 782 | Receptor kinase-like Gene Family | AT4G23190 | 51.233 | 2.14e-122 | 379 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Pvu5g0910 | PK_Tyr_Ser-Thr | 2.2e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu5g0910 | - | - | ccaj:109805721 | 1373.61 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pvu5g0910 | 5 | 24200166 | 24203696 | Pvu11g1581 | 11 | 39932310 | 39935581 | PCT | |
Pvu11g1566 | 11 | 39603327 | 39606811 | Pvu5g0910 | 5 | 24200166 | 24203696 | PCT |