Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0905 ATGGATTTCGATCCCGAGTTCCCCGTGCCTTCTTACAGAGAACGTGAAGCTATAAGCCATTACCTCAAAATCGAGCAAGAATTCATGCCTCATAGGGCGTTTTACACACAATCACGCAACGCTCATCTTCGGCTGATTGCGGTTAAGACGGTCGTTCAGCTCTCCGAGGGCAGAGTTATTGATGCGTACATTCCGTATATTGCAATGAATTACTTCGATCGCTTTGTTTCATCGAATCCGCTCTCAGTGAGAAGAGAAGCGATTTACAACCCCCTAAGGATAATGAGAATGGAATTTCGCATTCTCAGTGGACTTAACTGGCGAATGCGATCTGTAACTCCCTTTCACTTCCTGGACTACTATTATCCCACCTTCAAAAGAATCGGTGGTTTTAAACGCGAATCCATAAATGAGATCATAGTCCAGTCTCAAGGAGATGTCTACTTCACTCAATTCAGACCTTCTGAGATTGCAATGTCCGCTTTACTAGCTGCTACTTACCTTGGATATTCCTCACGGTTTACCTTTATTGAGGAATCAATTAGCATTTCGAGGAGCATCAAGATAAGTGGCAGTTCAGGAAAGGCTATCTTTTCTATGACAGATGCGGTTCCCTCCACGTTGGTAGAAGCTTCAGGATCGAATACACAAACAACGCAAGCAGAAGAAGAGTTAGAAAACGAAGTTGATTTACAAGTACAAGAAGAAGGCACGAGCTCGACTTCCCAGTTTCGGAACACGGTGATGGATGACGATGATGAAGAAGAAGAACCAAATGTAGCACCGTTAGCCCGCCGAAGAAGACGGAACAGTGGCGAGGAAGATGAAACCGAGGAAAAGAAACAAGGAGAGGAGAAGGAAACAAGGACATTAGAAGCTATATCTGAAGAGTCTGGGACCGGAGAAAGAGAGGACAAGAGCGAACGGACATCTGATGAATTTGTAGAAGATGAGACCGGAGCAAGAGATGACAATGGCAAGGTGCCCTCTGAAGAAAGTGTGCAAGCTGAGAGCGGAACATCTAAAGAAATAGGAGAAGCTGAGAGCAGAGCCAGAGAGGACAAGGGCAAGGCCGTGCAGGAAATAAGTGAAGTACAAGAAGAAAACGAGAATGAGTTACGACGAAGAAAGGGAAAGGGCAAGGCCGTGATGGAAATAGGTGATGAAGAGGAAGAAAACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAATGCCGTGCTGAAAATACGTGATGTAGAGGAAGAAGACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAATGCCGTGCTGAAAATACGTGATGTAGAGGAAGAAGACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAAGGCCGTGGTGGAAACACGTGATGTAGAGGAAGAAAACGAAAATGAGGACTTAACACGAAGAGTGGAGAGGCCAAGGAGAGGAACAGTAAGGTCAGAAGTAGGTCAGGCACCATTGCAAGCAATGAATTTTCAACTGCGGTGGCCTATTAGTGTGCGGCCAGGTGAGTATGTTCGCGATATAGATAGGAGCCTACAGACACATGATCCCTACATCAGAACCACTCGACGTTCTACATCAACAAGAGGGACCGACAGCGATCCAGATCTAGTTTCCAACGGTTGTCAATGCACCATCATGTAG 1659 0.4587 MDFDPEFPVPSYREREAISHYLKIEQEFMPHRAFYTQSRNAHLRLIAVKTVVQLSEGRVIDAYIPYIAMNYFDRFVSSNPLSVRREAIYNPLRIMRMEFRILSGLNWRMRSVTPFHFLDYYYPTFKRIGGFKRESINEIIVQSQGDVYFTQFRPSEIAMSALLAATYLGYSSRFTFIEESISISRSIKISGSSGKAIFSMTDAVPSTLVEASGSNTQTTQAEEELENEVDLQVQEEGTSSTSQFRNTVMDDDDEEEEPNVAPLARRRRRNSGEEDETEEKKQGEEKETRTLEAISEESGTGEREDKSERTSDEFVEDETGARDDNGKVPSEESVQAESGTSKEIGEAESRAREDKGKAVQEISEVQEENENELRRRKGKGKAVMEIGDEEEENENELRRRQRKGNAVLKIRDVEEEDENELRRRQRKGNAVLKIRDVEEEDENELRRRQRKGKAVVETRDVEEENENEDLTRRVERPRRGTVRSEVGQAPLQAMNFQLRWPISVRPGEYVRDIDRSLQTHDPYIRTTRRSTSTRGTDSDPDLVSNGCQCTIM* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0905 552 Coils Coil 355 375 - -
Pvu5g0905 552 Gene3D - 81 218 - -
Pvu5g0905 552 SUPERFAMILY Cyclin-like 13 109 IPR036915 -
Pvu5g0905 552 MobiDBLite consensus disorder prediction 259 330 - -
Pvu5g0905 552 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 90 174 - -
Pvu5g0905 552 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 85 - -
Pvu5g0905 552 PANTHER CYCLINS 90 174 IPR039361 -
Pvu5g0905 552 PANTHER CYCLINS 1 85 IPR039361 -
Pvu5g0905 552 MobiDBLite consensus disorder prediction 210 425 - -
Pvu5g0905 552 MobiDBLite consensus disorder prediction 527 552 - -
Pvu5g0905 552 MobiDBLite consensus disorder prediction 439 484 - -
Pvu5g0905 552 MobiDBLite consensus disorder prediction 343 386 - -
Pvu5g0905 552 MobiDBLite consensus disorder prediction 232 246 - -
Pvu5g0905 552 MobiDBLite consensus disorder prediction 393 425 - -
Pvu5g0905 552 MobiDBLite consensus disorder prediction 439 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0905 Pvu-Chr5 23541117 23544051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0905 14 167 Core Cell Cycle Gene Families AT4G03270 26.531 1.47e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0905 - K18812 pvu:PHAVU_005G087500g 970.689