Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu5g0905 | ATGGATTTCGATCCCGAGTTCCCCGTGCCTTCTTACAGAGAACGTGAAGCTATAAGCCATTACCTCAAAATCGAGCAAGAATTCATGCCTCATAGGGCGTTTTACACACAATCACGCAACGCTCATCTTCGGCTGATTGCGGTTAAGACGGTCGTTCAGCTCTCCGAGGGCAGAGTTATTGATGCGTACATTCCGTATATTGCAATGAATTACTTCGATCGCTTTGTTTCATCGAATCCGCTCTCAGTGAGAAGAGAAGCGATTTACAACCCCCTAAGGATAATGAGAATGGAATTTCGCATTCTCAGTGGACTTAACTGGCGAATGCGATCTGTAACTCCCTTTCACTTCCTGGACTACTATTATCCCACCTTCAAAAGAATCGGTGGTTTTAAACGCGAATCCATAAATGAGATCATAGTCCAGTCTCAAGGAGATGTCTACTTCACTCAATTCAGACCTTCTGAGATTGCAATGTCCGCTTTACTAGCTGCTACTTACCTTGGATATTCCTCACGGTTTACCTTTATTGAGGAATCAATTAGCATTTCGAGGAGCATCAAGATAAGTGGCAGTTCAGGAAAGGCTATCTTTTCTATGACAGATGCGGTTCCCTCCACGTTGGTAGAAGCTTCAGGATCGAATACACAAACAACGCAAGCAGAAGAAGAGTTAGAAAACGAAGTTGATTTACAAGTACAAGAAGAAGGCACGAGCTCGACTTCCCAGTTTCGGAACACGGTGATGGATGACGATGATGAAGAAGAAGAACCAAATGTAGCACCGTTAGCCCGCCGAAGAAGACGGAACAGTGGCGAGGAAGATGAAACCGAGGAAAAGAAACAAGGAGAGGAGAAGGAAACAAGGACATTAGAAGCTATATCTGAAGAGTCTGGGACCGGAGAAAGAGAGGACAAGAGCGAACGGACATCTGATGAATTTGTAGAAGATGAGACCGGAGCAAGAGATGACAATGGCAAGGTGCCCTCTGAAGAAAGTGTGCAAGCTGAGAGCGGAACATCTAAAGAAATAGGAGAAGCTGAGAGCAGAGCCAGAGAGGACAAGGGCAAGGCCGTGCAGGAAATAAGTGAAGTACAAGAAGAAAACGAGAATGAGTTACGACGAAGAAAGGGAAAGGGCAAGGCCGTGATGGAAATAGGTGATGAAGAGGAAGAAAACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAATGCCGTGCTGAAAATACGTGATGTAGAGGAAGAAGACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAATGCCGTGCTGAAAATACGTGATGTAGAGGAAGAAGACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAAGGCCGTGGTGGAAACACGTGATGTAGAGGAAGAAAACGAAAATGAGGACTTAACACGAAGAGTGGAGAGGCCAAGGAGAGGAACAGTAAGGTCAGAAGTAGGTCAGGCACCATTGCAAGCAATGAATTTTCAACTGCGGTGGCCTATTAGTGTGCGGCCAGGTGAGTATGTTCGCGATATAGATAGGAGCCTACAGACACATGATCCCTACATCAGAACCACTCGACGTTCTACATCAACAAGAGGGACCGACAGCGATCCAGATCTAGTTTCCAACGGTTGTCAATGCACCATCATGTAG | 1659 | 0.4587 | MDFDPEFPVPSYREREAISHYLKIEQEFMPHRAFYTQSRNAHLRLIAVKTVVQLSEGRVIDAYIPYIAMNYFDRFVSSNPLSVRREAIYNPLRIMRMEFRILSGLNWRMRSVTPFHFLDYYYPTFKRIGGFKRESINEIIVQSQGDVYFTQFRPSEIAMSALLAATYLGYSSRFTFIEESISISRSIKISGSSGKAIFSMTDAVPSTLVEASGSNTQTTQAEEELENEVDLQVQEEGTSSTSQFRNTVMDDDDEEEEPNVAPLARRRRRNSGEEDETEEKKQGEEKETRTLEAISEESGTGEREDKSERTSDEFVEDETGARDDNGKVPSEESVQAESGTSKEIGEAESRAREDKGKAVQEISEVQEENENELRRRKGKGKAVMEIGDEEEENENELRRRQRKGNAVLKIRDVEEEDENELRRRQRKGNAVLKIRDVEEEDENELRRRQRKGKAVVETRDVEEENENEDLTRRVERPRRGTVRSEVGQAPLQAMNFQLRWPISVRPGEYVRDIDRSLQTHDPYIRTTRRSTSTRGTDSDPDLVSNGCQCTIM* | 553 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu5g0905 | 552 | Coils | Coil | 355 | 375 | - | - | |
Pvu5g0905 | 552 | Gene3D | - | 81 | 218 | - | - | |
Pvu5g0905 | 552 | SUPERFAMILY | Cyclin-like | 13 | 109 | IPR036915 | - | |
Pvu5g0905 | 552 | MobiDBLite | consensus disorder prediction | 259 | 330 | - | - | |
Pvu5g0905 | 552 | PANTHER | CARBOXY-TERMINAL DOMAIN CYCLIN | 90 | 174 | - | - | |
Pvu5g0905 | 552 | PANTHER | CARBOXY-TERMINAL DOMAIN CYCLIN | 1 | 85 | - | - | |
Pvu5g0905 | 552 | PANTHER | CYCLINS | 90 | 174 | IPR039361 | - | |
Pvu5g0905 | 552 | PANTHER | CYCLINS | 1 | 85 | IPR039361 | - | |
Pvu5g0905 | 552 | MobiDBLite | consensus disorder prediction | 210 | 425 | - | - | |
Pvu5g0905 | 552 | MobiDBLite | consensus disorder prediction | 527 | 552 | - | - | |
Pvu5g0905 | 552 | MobiDBLite | consensus disorder prediction | 439 | 484 | - | - | |
Pvu5g0905 | 552 | MobiDBLite | consensus disorder prediction | 343 | 386 | - | - | |
Pvu5g0905 | 552 | MobiDBLite | consensus disorder prediction | 232 | 246 | - | - | |
Pvu5g0905 | 552 | MobiDBLite | consensus disorder prediction | 393 | 425 | - | - | |
Pvu5g0905 | 552 | MobiDBLite | consensus disorder prediction | 439 | 482 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu5g0905 | Pvu-Chr5 | 23541117 | 23544051 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu5g0905 | 14 | 167 | Core Cell Cycle Gene Families | AT4G03270 | 26.531 | 1.47e-12 | 66.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu5g0905 | - | K18812 | pvu:PHAVU_005G087500g | 970.689 |