LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu5g0905	ATGGATTTCGATCCCGAGTTCCCCGTGCCTTCTTACAGAGAACGTGAAGCTATAAGCCATTACCTCAAAATCGAGCAAGAATTCATGCCTCATAGGGCGTTTTACACACAATCACGCAACGCTCATCTTCGGCTGATTGCGGTTAAGACGGTCGTTCAGCTCTCCGAGGGCAGAGTTATTGATGCGTACATTCCGTATATTGCAATGAATTACTTCGATCGCTTTGTTTCATCGAATCCGCTCTCAGTGAGAAGAGAAGCGATTTACAACCCCCTAAGGATAATGAGAATGGAATTTCGCATTCTCAGTGGACTTAACTGGCGAATGCGATCTGTAACTCCCTTTCACTTCCTGGACTACTATTATCCCACCTTCAAAAGAATCGGTGGTTTTAAACGCGAATCCATAAATGAGATCATAGTCCAGTCTCAAGGAGATGTCTACTTCACTCAATTCAGACCTTCTGAGATTGCAATGTCCGCTTTACTAGCTGCTACTTACCTTGGATATTCCTCACGGTTTACCTTTATTGAGGAATCAATTAGCATTTCGAGGAGCATCAAGATAAGTGGCAGTTCAGGAAAGGCTATCTTTTCTATGACAGATGCGGTTCCCTCCACGTTGGTAGAAGCTTCAGGATCGAATACACAAACAACGCAAGCAGAAGAAGAGTTAGAAAACGAAGTTGATTTACAAGTACAAGAAGAAGGCACGAGCTCGACTTCCCAGTTTCGGAACACGGTGATGGATGACGATGATGAAGAAGAAGAACCAAATGTAGCACCGTTAGCCCGCCGAAGAAGACGGAACAGTGGCGAGGAAGATGAAACCGAGGAAAAGAAACAAGGAGAGGAGAAGGAAACAAGGACATTAGAAGCTATATCTGAAGAGTCTGGGACCGGAGAAAGAGAGGACAAGAGCGAACGGACATCTGATGAATTTGTAGAAGATGAGACCGGAGCAAGAGATGACAATGGCAAGGTGCCCTCTGAAGAAAGTGTGCAAGCTGAGAGCGGAACATCTAAAGAAATAGGAGAAGCTGAGAGCAGAGCCAGAGAGGACAAGGGCAAGGCCGTGCAGGAAATAAGTGAAGTACAAGAAGAAAACGAGAATGAGTTACGACGAAGAAAGGGAAAGGGCAAGGCCGTGATGGAAATAGGTGATGAAGAGGAAGAAAACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAATGCCGTGCTGAAAATACGTGATGTAGAGGAAGAAGACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAATGCCGTGCTGAAAATACGTGATGTAGAGGAAGAAGACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAAGGCCGTGGTGGAAACACGTGATGTAGAGGAAGAAAACGAAAATGAGGACTTAACACGAAGAGTGGAGAGGCCAAGGAGAGGAACAGTAAGGTCAGAAGTAGGTCAGGCACCATTGCAAGCAATGAATTTTCAACTGCGGTGGCCTATTAGTGTGCGGCCAGGTGAGTATGTTCGCGATATAGATAGGAGCCTACAGACACATGATCCCTACATCAGAACCACTCGACGTTCTACATCAACAAGAGGGACCGACAGCGATCCAGATCTAGTTTCCAACGGTTGTCAATGCACCATCATGTAG	1659	0.4587	MDFDPEFPVPSYREREAISHYLKIEQEFMPHRAFYTQSRNAHLRLIAVKTVVQLSEGRVIDAYIPYIAMNYFDRFVSSNPLSVRREAIYNPLRIMRMEFRILSGLNWRMRSVTPFHFLDYYYPTFKRIGGFKRESINEIIVQSQGDVYFTQFRPSEIAMSALLAATYLGYSSRFTFIEESISISRSIKISGSSGKAIFSMTDAVPSTLVEASGSNTQTTQAEEELENEVDLQVQEEGTSSTSQFRNTVMDDDDEEEEPNVAPLARRRRRNSGEEDETEEKKQGEEKETRTLEAISEESGTGEREDKSERTSDEFVEDETGARDDNGKVPSEESVQAESGTSKEIGEAESRAREDKGKAVQEISEVQEENENELRRRKGKGKAVMEIGDEEEENENELRRRQRKGNAVLKIRDVEEEDENELRRRQRKGNAVLKIRDVEEEDENELRRRQRKGKAVVETRDVEEENENEDLTRRVERPRRGTVRSEVGQAPLQAMNFQLRWPISVRPGEYVRDIDRSLQTHDPYIRTTRRSTSTRGTDSDPDLVSNGCQCTIM*	553

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu5g0905	552	Coils	Coil	355	375	-	-
	Pvu5g0905	552	Gene3D	-	81	218	-	-
	Pvu5g0905	552	SUPERFAMILY	Cyclin-like	13	109	IPR036915	-
	Pvu5g0905	552	MobiDBLite	consensus disorder prediction	259	330	-	-
	Pvu5g0905	552	PANTHER	CARBOXY-TERMINAL DOMAIN CYCLIN	90	174	-	-
	Pvu5g0905	552	PANTHER	CARBOXY-TERMINAL DOMAIN CYCLIN	1	85	-	-
	Pvu5g0905	552	PANTHER	CYCLINS	90	174	IPR039361	-
	Pvu5g0905	552	PANTHER	CYCLINS	1	85	IPR039361	-
	Pvu5g0905	552	MobiDBLite	consensus disorder prediction	210	425	-	-
	Pvu5g0905	552	MobiDBLite	consensus disorder prediction	527	552	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu5g0905	Pvu-Chr5	23541117	23544051	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu5g0905	14	167	Core Cell Cycle Gene Families	AT4G03270	26.531	1.47e-12	66.6

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu5g0905	-		K18812	pvu:PHAVU_005G087500g	970.689

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