Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0886 ATGAAACTTGTAAAGTGGGTTTCCTTTGTTTTTGTTGTTTATTTGTTTTTGGTGAATGGTTCATTTGCTACATTCACTCCTCGTGATAATTATCTAATTACTTGTGGTTCCTCCCAAAGTATCACTTTCCAAGATCGCACTTTCGTTCCTGATTCACAGCATTCTTCTCCGGAGTTGAAAACCTCGAATTCTGTTGTTGCTAGTTCAAATTCTAGTGTCCCTTTCCCAATATATCAATCAGCTAGGATTTTCACTGAGAAAGCTTCTTATAGGTTTAAGGTTGATGAAGGTAGGCACTGGCTGAGGCTATATTTTTCCCCTCTAACCAACTCAGCCCATAATTTGACTTCTGCTGTTATAACAGTGGTCACTGATGATTTTGTTCTATTGTGCAACTTCTCCTTTAGGAACTACAATGGTTCATATATGTTTAGGGAGTATGCTATCAATGTTACCTCTGATACCTTAACTGTCACCTTCATTCCTTCAAATGGTTCAGCAGTAGCTTTCGTCAATGCAATTGAAGTTGTTTCCATGCCAAATGACTTGTTTGTTGATCAGGCATTGGCCCTTAACCCAACTGCACCATTCAATGGCCTTTCTGAACTTGCTTTTGAGACTGTTTATCGCTTAAACGTAGGAGGTCCCTTGCTCACTCCCCAGAATGACACCCTGGGAAGGACTTGGGAGAATGATCAGAAATACCTCCATGTCAATAGTTCAGTCACTAATGTGTCTGTTAACCCTTCCAGCATTAAGTATCATCCAGGTGTTACACCTGAGACGGCACCCAATTGGGTCTATGCCACTTCTGAAGCAATGGGGGATGCAAATGTAGCCAATTCAAATTTCAACATTACTTGGGTCTTTACTGTGGATCCAAACTTCTCCTATTTTATCCGGGTGCACTTTTGTGATATTTTTAGCAAGTCTCTCAACACTTTAGTGTTCAATTTGTTCATAAACACTGACATAGCTCTTGGAAGCCTTGACCTCTCATCCATTACAAATGATTTGTCTGTGCCTTACTATAAGGACTTTATTTCCAATGCCTCAGCAGACTCCAACATTTTGACAGTAAGTGTTGGTCCTGATACAATGGCAGATATCACAAATGCCACTATGAATGGACTGGAGGTTATAAAGATCAGCAATGCGTTCAAGAGCTTGGATGGACTTTCTTCAGTTGAGAGTCTCCTTCCTAGTTCATCATCAAGTAAAAGCAAGATGGGAATAATAGTAGGTTCTTCTATTGGAGTCGTGGCTGTTATAGCTTTGGTTGGTTTGTGTTATTGCTGCTTGGTGAGATACAAATTAAAGTCTACTCAACAGGGTCATTCTTGGCTGCCTTTACCCTTATATGGAAACTCCCAGACCATGACAAAAATGTCAACAACTTCTCAGAAGAGTGCAACTGCAAGCTGCATTTCTTTAGCATCATCAAATCTCGGACGGTTCTTTAATTTCCAAGAGATCCTAGATGCAACCAACAAGTTTGATGAGAAACTGCTTCTTGGTGTTGGTGGCTTTGGCAGGGTTTATAAGGGAACACTTGAAGATGGGACCAATGTGGCTGTTAAAAGGGGGAACCCCAGATCCGAACAAGGTCTTGCCGAATTCCGAACAGAAATTGAGATGCTATCCAAGCTTCGCCATCGCCATCTTGTGTCCCTCATTGGCTATTGTGATGAGAGATCGGAAATGGTTCTTGTCTATGAATACATGGCTAATGGACCTCTCAGGAGTCATCTATATGGAACTGACCTACCACCTCTATCATGGAAGCAACGGCTTGAAATTTGCATTGGAGCAGCAAGAGGTCTTCATTATCTCCACACTGGAGCATCTCAAAGCATAATTCATCGCGATGTAAAGACAACCAACATCCTCTTAGATGATAATTTTGTTGCAAAGGTTGCTGACTTTGGCCTCTCAAAAACTGGTCCTGCCCTTGATCAGACTCATGTGAGCACTGCTGTTAAAGGTAGTTTTGGTTATCTTGATCCTGAATACTTCAGAAGACAACAGCTTACAGAGAAATCAGATGTATATTCATTTGGAGTAGTTTTGATGGAAGTGTTATGCACAAGACCAGCCTTGAACCCTGTCCTTCCTAGGGATCAGGTGAACATAGCTGAGTGGGCAATGAGCTGGCAGAAGAAAGGAATGCTTGATCAAATCATGGATCAGAATCTAGTGGGGAAAGTAAATCCTGCTTCTCTGAAGAAGTTTGGGGAAACAGCCGAGAAATGCTTGGCTGAGTATGGAGTGGATAGGCCTTCCATGGGTGATGTATTGTGGAATCTTGAATATGCTTTGCAACTTCAAGAGACCTCATCAGCACTCATGGAGCCTGAAGATAACAGCACAAACCACATTACTGGAATTCAGTTGACTCGTCTTGAGCCTTTTGACAACAGTGTTAGTATGATTGATGGGGTCAACTCTTTCACAGATGATGATGCAGAAGATGCTGCCACAAGTGCTGTGTTCTCACAATTGGTAAATCCTCGAGGAAGATGA 2523 0.4178 MKLVKWVSFVFVVYLFLVNGSFATFTPRDNYLITCGSSQSITFQDRTFVPDSQHSSPELKTSNSVVASSNSSVPFPIYQSARIFTEKASYRFKVDEGRHWLRLYFSPLTNSAHNLTSAVITVVTDDFVLLCNFSFRNYNGSYMFREYAINVTSDTLTVTFIPSNGSAVAFVNAIEVVSMPNDLFVDQALALNPTAPFNGLSELAFETVYRLNVGGPLLTPQNDTLGRTWENDQKYLHVNSSVTNVSVNPSSIKYHPGVTPETAPNWVYATSEAMGDANVANSNFNITWVFTVDPNFSYFIRVHFCDIFSKSLNTLVFNLFINTDIALGSLDLSSITNDLSVPYYKDFISNASADSNILTVSVGPDTMADITNATMNGLEVIKISNAFKSLDGLSSVESLLPSSSSSKSKMGIIVGSSIGVVAVIALVGLCYCCLVRYKLKSTQQGHSWLPLPLYGNSQTMTKMSTTSQKSATASCISLASSNLGRFFNFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMVLVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPRDQVNIAEWAMSWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTRLEPFDNSVSMIDGVNSFTDDDAEDAATSAVFSQLVNPRGR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0886 840 Pfam Protein tyrosine and serine/threonine kinase 504 765 IPR001245 GO:0004672|GO:0006468
Pvu5g0886 840 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0886 840 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 17 833 - -
Pvu5g0886 840 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Pvu5g0886 840 Pfam Malectin-like domain 33 382 IPR024788 -
Pvu5g0886 840 SMART serkin_6 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0886 840 Gene3D Transferase(Phosphotransferase) domain 1 575 794 - -
Pvu5g0886 840 Gene3D Phosphorylase Kinase; domain 1 457 574 - -
Pvu5g0886 840 PANTHER OS07G0166700 PROTEIN 17 833 IPR045272 GO:0004714|GO:0006468
Pvu5g0886 840 Gene3D - 203 385 - -
Pvu5g0886 840 Gene3D - 30 180 - -
Pvu5g0886 840 CDD STKc_IRAK 505 770 - -
Pvu5g0886 840 SUPERFAMILY Protein kinase-like (PK-like) 478 770 IPR011009 -
Pvu5g0886 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0886 Pvu-Chr5 21097746 21101178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0886 1 840 Receptor kinase-like Gene Family AT3G46290 51.700 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu5g0886 Malectin_like 1.5e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0886 - - gmx:100809700 1379.39