Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0850 ATGAAATCACAGGCACAGTTTCCAGAAAAGATATCAGGGCAGGTACCTAATCAATCAGGGTCTCAATTGCCTGGCCTTATTCAATTGAATGGAAATGCCCTGCATCAGATGCCAAATTTAGGTGTTTTTCCAACTATGGACCCTGAATTTATTAGAGCTCGGTCTTTTACGCTAGAAAAAATATGTAATATATTATTGCAACGGTACCAGCATCCAGTTACGGAAGCACATAAAAGGAAGGTTAAGGATCTTGCAAAACGTCTCGAAGAGGGCATGTTAAAAACTGCTATATCTAAGGAGGACTACATGAACTTAGACACGCTAGAGAGTCGCCTATCTAATTTCCTTAGAATGTCATCTATGACTACTCACAACCAACATCCTCAGATTGTTAGCTCTTCTCCAATTGCTACAATGATACCAACCCCTGGTATGTCACATATTACAAATTCAACCATGATCACGGCATCTTCTGTGGATACCTCAATGATTGCTGCCAGTGGATGCAACAGTATAGCATCTCCATCTGTCAATAGTGTAAGCATGTTACCAGCAGGTGGCATGCTTGGCAGCACCTTAAATAGATCTGATGGAGGAAATATGGCATCGGTTGGGTTGCAAAGAATTACTAGTCAGATGATTCCAACTCCAGGATTTAGTGTCAGCAATAATCATTCATATACAAATATGGAAACTTCAAGTAACAACAGTTCTTTTTCTGGTGTTGATTCTTCATTACTGTTGCCAGCACAGTCGCAGCAGCAGCAGCAGCGGCACCAGAAGCTGCAAGATAGTGACCACAACAATCATACATTGCACAACCTTGGCAGTCAAATTGATGGTGGAAGGAGATCTGATTTACTGCAAAACACATTTGCATATCCAAATGGTTCTATAAATAGTGGGCTAGGTTTGATTGGAAACAGCATACAAATTGCAAATGAACTAGGCACTGATGACTACACTTCAGCATACTCTAATTCCCCTAAAAACTTACAGCAGCTCTTTGATCAAAATCAACAACCAGTAGTGCAGGGTGACAGATATGGATTGATTAATGTTGACACTTTTACTTCTGGAAGCTATTATGCATCTGCGACATCCTCTGGTTCTATGTTGAACACTCAGAACATGAATGCTGTAAAATTGCCATCAATACCCATTTCCAGCTCACTCATAAGTGGTCATTCAAATTTGCACAGTATGAATCATACTGCTCATCACAACTCTCAAGCAATAAATTCGTTGAAAAATTTAAAATTCCAGTCTTCCCTGACTTCAAGAAATGACCATGTAAATACTCAACATCAATATGAGCAAAGACCCCAACAATGTCACCAGTCAGATTGGTATGCTCCTCAGCAATTTCAGCTGAATCCGCTAAGTCAGCAACCTCAGCATTTGGTCAACAATGATGCCTTCCCTCAGTCTCAACTCTCTTCCGGTCTAGACAATCACGTAAAGTCTGAGCCTGGTGTTGAACCACATAAAGAAATTCTCAATTCTCAGTTTTCTGAGCAGTTCCATGTATCTGAAATGCAGAATCAGTTCCAACAGGTTTCTTCTAAAGATCGCTCTAAGGTTGCTCAGCATGTTTCATTGGATGAGCACAACTCATCAGCATCACCACCTCAAATTTCTCAACAAATGTTGCATCCTTATCAATTGGTTTCAGAGTCTCAAAATAATTTTAACTGTGTTTCAGTTGGGTCACAATCCAAATCCATGCTTAAAAATCAGTGGCCTCAATCACAAGATGAAAACGATGTTCCTAAGGGTATGTCACATGAACAGCGTCTTCCCATTGATTTTCATCAAAGAATACCAAGGCAAGATGAAGCTCATTGCAGTAATTTACCATTAGATGGATCTATTATTGGTCAAGCTGTTGCCTCTAGAAGCTCAGTTGAGCTGCTAGACCCAAGCAGTTCTAAAGAGAAGGAACACAGAAATCAACAGAAGTGGCTTTTATTTTTATTTCATGCTCGACACTGTTCTGCACCAGAAGGGCGATGCCAAGAACGCCATTGTTCAATTATGCAGAAGTTATGTGATCACGTAGATGGATGCATTATATCTCATTGTCCATATCCTCGTTGCCATCATACCAGGAAATTGCTTCGTCATTTCATAAAATGCAGGAATCTGTATTGCCCTGTTTGCGTTTTAGTAAAAAAGTATCGGCATGCATTTCAACGTAAGCCCCAAATTCAGTCAGATCCTGAACCGTGTTTGCCAATTGCTTTAAATGGATCCTGCGAAACCTTTAATGTGGTGGGACCATCACCTAGATTTATCTCCAAGTCTCAACCAGTGGCTGAAACTTCAGAAGACCTACCAGCTCCAAAGCGTATGAAAACTGAGCAATACACCAAGTCCATTAATCCTGAATATGATAATGCTGCTTTATCTGCTCTTCCAAACTGTGAATTAAGAGATTCGAAGGATACTCATTGCGCATCCTATTCTTGTGGGGATATGTCTGTATCAATTAAATCTGAGCTTAATGAAGTTAAAGCAGAAGTTCTGGTGCATTCAGTGCATGAAAATCTCAGTGAGACAAGAATGGAGGAGGATAATGCACATGATAAAAGGCCCACAGGTAAGCCTGTCACATACAATGAGCCAGCTAATATAGTTAGGCCGGAGAATATGAAAACTGAGAAAGAAAGTGGTCAGGATAAGCAAGAAAATGTGACCCAGCCATCTGAACCTGGAGCTGGAACCAAGTCTGGTAAGCCAAAAATAAAGGGGGTCTCATTGACTGAGCTGTTTACTCCTGAGCAAGTCAGGGAACATATCACTGGCCTCAGGCAATGGGTTGGCCAAAGCAAATCGAAGGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAGTTGTGTGCAGTAGAGAAATTAACTTTTGAACCACCCCCTATTTATTGCACAACATGTGGTGTTCGGATTAAACGCAATAATATGTATTATACAATGGGTACGGGTGATACACGACATTATTTTTGTATTCCGTGCTACAATGAGCCTCGTGGAGACACCATTGTCGTTGATGGGACTTCTTTTCCTAAGTCAAGGTTAGAGAAGAAGAAAAATGATGAGGAAACAGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCATGGCAACATCAAATTTGTGCCTTATTTAATGGTCGAAGAAATGATAGTGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAAGTAGAAAGAGGTGAGCGCAAGCCCTTACCCCAAAATGCTGTTCTTGGAGCCAAGGATTTGCCCAGAACAATTCTCAGTGATCAAATAGAGCAACGATTATTTAGGAGACTAAAGCATGAGAGACAAGAGAGGGCCCGACTTCAAGGGAAAAATTATGATGAGGTGCCTGGAGCTGAATCTCTTGTTATAAGGGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTTAAACAGCGGTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCATACAAATCGAAAGTAGTTTTGTTGTTTCAGAAGATTGAAGGGGTTGAAGTTTGCCTCTTTGGCATGTATGTTCAAGAGTTTGGATCTGAAAGTAAATTTCCAAATCAGCGCCGGGTTTATCTTTCATATTTGGACTCTGTTAAGTATTTTAGGCCTGAGGTTAAAGCAGTAACTGGAGAAGCTCTTCGAACATTTGTTTATCATGAAATTCTGATTGGATACCTTGAGTATTGCAAGAAACGTGGTTTTACTAGCTGCTACATTTGGGCTTGTCCTCCACTGAAGGGTGAAGATTATATTTTATATTGTCATCCGGAAATTCAGAAAACACCAAAATCTGATAAGCTTAGGGAATGGTACCTTGCTATGTTAAGAAAAGCTTCCAAGGAGAATATTGTGGTTGATCTCACCAACTTGTACGACCACTTCTTTGTGTCTTCTGGTGAATGTAGGGCTAAGGTTACAGCTGCAAGGCTCCCATATTTTGATGGTGACTATTGGCCTGGGGCTGCCGAGGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGAAGAAAACAAAATAAGAAAGGAACAACTAAGAAGACTATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCAGATCTTTCTGGAAATGCCACAAAAGATCTTCTCCTAATGCACAAACTCGGTGAAACCATTTCCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGCAGTCATTGTTGTATTCTAATGGTGTCAGGCAACCGTTGGGTTTGCAGGCAATGCAAGAATTTTCAGATTTGTGACAAGTAA 4335 0.4046 MKSQAQFPEKISGQVPNQSGSQLPGLIQLNGNALHQMPNLGVFPTMDPEFIRARSFTLEKICNILLQRYQHPVTEAHKRKVKDLAKRLEEGMLKTAISKEDYMNLDTLESRLSNFLRMSSMTTHNQHPQIVSSSPIATMIPTPGMSHITNSTMITASSVDTSMIAASGCNSIASPSVNSVSMLPAGGMLGSTLNRSDGGNMASVGLQRITSQMIPTPGFSVSNNHSYTNMETSSNNSSFSGVDSSLLLPAQSQQQQQRHQKLQDSDHNNHTLHNLGSQIDGGRRSDLLQNTFAYPNGSINSGLGLIGNSIQIANELGTDDYTSAYSNSPKNLQQLFDQNQQPVVQGDRYGLINVDTFTSGSYYASATSSGSMLNTQNMNAVKLPSIPISSSLISGHSNLHSMNHTAHHNSQAINSLKNLKFQSSLTSRNDHVNTQHQYEQRPQQCHQSDWYAPQQFQLNPLSQQPQHLVNNDAFPQSQLSSGLDNHVKSEPGVEPHKEILNSQFSEQFHVSEMQNQFQQVSSKDRSKVAQHVSLDEHNSSASPPQISQQMLHPYQLVSESQNNFNCVSVGSQSKSMLKNQWPQSQDENDVPKGMSHEQRLPIDFHQRIPRQDEAHCSNLPLDGSIIGQAVASRSSVELLDPSSSKEKEHRNQQKWLLFLFHARHCSAPEGRCQERHCSIMQKLCDHVDGCIISHCPYPRCHHTRKLLRHFIKCRNLYCPVCVLVKKYRHAFQRKPQIQSDPEPCLPIALNGSCETFNVVGPSPRFISKSQPVAETSEDLPAPKRMKTEQYTKSINPEYDNAALSALPNCELRDSKDTHCASYSCGDMSVSIKSELNEVKAEVLVHSVHENLSETRMEEDNAHDKRPTGKPVTYNEPANIVRPENMKTEKESGQDKQENVTQPSEPGAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNEPRGDTIVVDGTSFPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDSGQAEYTCPNCYIQEVERGERKPLPQNAVLGAKDLPRTILSDQIEQRLFRRLKHERQERARLQGKNYDEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSESKFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKASKENIVVDLTNLYDHFFVSSGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNATKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCRQCKNFQICDK* 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0850 1444 MobiDBLite consensus disorder prediction 511 545 - -
Pvu5g0850 1444 MobiDBLite consensus disorder prediction 1 23 - -
Pvu5g0850 1444 SUPERFAMILY RING/U-box 1393 1443 - -
Pvu5g0850 1444 ProSiteProfiles Zinc finger TAZ-type profile. 644 724 IPR000197 -
Pvu5g0850 1444 SMART TAZ_2 646 724 IPR000197 -
Pvu5g0850 1444 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1030 1078 IPR013083 -
Pvu5g0850 1444 SMART KAT11_2 1128 1425 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pvu5g0850 1444 MobiDBLite consensus disorder prediction 1359 1383 - -
Pvu5g0850 1444 SUPERFAMILY FYVE/PHD zinc finger 1039 1079 IPR011011 -
Pvu5g0850 1444 MobiDBLite consensus disorder prediction 850 916 - -
Pvu5g0850 1444 SUPERFAMILY TAZ domain 645 727 IPR035898 -
Pvu5g0850 1444 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1095 1444 IPR031162 GO:0004402
Pvu5g0850 1444 PANTHER CBP/P300-RELATED 144 1443 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pvu5g0850 1444 MobiDBLite consensus disorder prediction 214 282 - -
Pvu5g0850 1444 Pfam Histone acetylation protein 1135 1355 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pvu5g0850 1444 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 144 1443 - -
Pvu5g0850 1444 MobiDBLite consensus disorder prediction 473 492 - -
Pvu5g0850 1444 MobiDBLite consensus disorder prediction 214 259 - -
Pvu5g0850 1444 Pfam TAZ zinc finger 653 721 IPR000197 -
Pvu5g0850 1444 CDD PHD_HAC_like 1005 1077 - -
Pvu5g0850 1444 Pfam PHD-finger 1036 1078 IPR019787 -
Pvu5g0850 1444 MobiDBLite consensus disorder prediction 850 869 - -
Pvu5g0850 1444 Gene3D TAZ domain 640 729 IPR035898 -
Pvu5g0850 1444 ProSiteProfiles Zinc finger ZZ-type profile. 1413 1444 IPR000433 GO:0008270
Pvu5g0850 1444 ProSitePatterns Zinc finger PHD-type signature. 1006 1077 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0850 Pvu-Chr5 19731357 19741670 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pvu5g0850 HAT_KAT11 3.5e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0850 K04498 - gmx:100800511 2397.85