Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0846 ATGAACACTTCTTTCGCAAAGTTTTACAGGAGATGGTTCGAGCAGCTGCAGGAGATGGTGCAGCGGTTGAAGGATGAGCACAATGAGGAGGTGATGGACAAGGTGATGAGGCAGCACCAGGACTACTACAGAGCAAAATGGGCGGCGGTGGAGAAGGATCCTCTCTGCGTGTTCCTTTCGCCATGGACCACCACTCTTGAACGCTCTCTCCACTGGATCACTGGGTGGCGCCCCACCACCGCCTTCCACCTCATCTACACTGAGTCTTCCCTCCTCTTTGAGTCTCACATCATCGATATCCTCCATGGCCTCCGCACTGGAGATCTGGGCGACCTCACCCCCTCTCAGTTTCGTCATGTCAGCGATCTCCAGTGTGATACTGTGAAAGAGGAGAATGCAATCCAAGAAGAGCTCTCAGAGTGGCAGGACAGTGCAAGCGAGATGGGGGATCCTGACATGGACATGAATGAGAAGATCATACAGCTGGTGCCCATAATAAAAAAAGCAGATGATCTACGGCTGACAACTCTGCGGAGCGTGGTAAGATTGCTGTCAACACAGCAGGCTATCGAATTCTTGATTGCCTCAGGGGAGTTGCTCATTGGGATTCGCAGCTGGGGAATGAATCAGGACTCCTCAACCTCATAA 648 0.5216 MNTSFAKFYRRWFEQLQEMVQRLKDEHNEEVMDKVMRQHQDYYRAKWAAVEKDPLCVFLSPWTTTLERSLHWITGWRPTTAFHLIYTESSLLFESHIIDILHGLRTGDLGDLTPSQFRHVSDLQCDTVKEENAIQEELSEWQDSASEMGDPDMDMNEKIIQLVPIIKKADDLRLTTLRSVVRLLSTQQAIEFLIASGELLIGIRSWGMNQDSSTS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0846 215 Coils Coil 13 33 - -
Pvu5g0846 215 Pfam Seed dormancy control 16 87 IPR025422 GO:0006351|GO:0043565
Pvu5g0846 215 PANTHER - 3 213 - -
Pvu5g0846 215 ProSiteProfiles DOG1 domain profile. 2 213 IPR025422 GO:0006351|GO:0043565
Pvu5g0846 215 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 3 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0846 Pvu-Chr5 19459854 19461168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0846 9 195 bZIP Transcription Factor Family AT5G06960 29.082 1.77e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0846 - - pvu:PHAVU_005G081900g 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0846 5 19459854 19461168 Pvu5g0846 5 19459854 19461168 ECH