Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0831 ATGGAGAATCAGCTTTCAAAAGAAAGAAGGGCAATGGAAGAAGAACTAGTCAGAGGGCGTGAGATAGCAAACCAGTTACTTGAAGTGTGTGTTCATAGATCCAACACTCATCATCATGAAGATGTACACATGCTTCCCTTCATTGAAGATCTTGTGCGCAAGGTGCTGTGTTCATTCACAAACACCCTTTTGCTTTTGAACACTGATAATGATGTCACTAATGAGGTTTCTATGCCTCTCACTGTCAAAGATACCCCTTCGTTTGCTAAATGTCCAAAACCCCAGCATACTGATGAGGTTTGCAAGAGTTTCTTGCAAACTGAAAAACGAAGAGGGTACTACAAGAAAAAATCAAGTGCACCAACATGGGTGACTAACAGCTCAATTCTGATGGAAGATGGCTATGTATGGAGAAAGTATGGACAAAAGATAACAACGAATGCAAAATACTTCAGAAGCTACTATAGATGCACTCACAAACATGACAAGGGTTGTCCAGCAATCAAACAGGTTCAGAGAATTCAAGAAGACCCTCCATTGTACCGGACAACATATTATGGTAATCACAATTGCAAAAGCTATTCAAGTTCAGATATAATTATGGAATCAGCTTCTCCTTCTGGCTCTTCTGTGTTCCTTAGCTTCAGTAACACCTTGCCAACCAAACAACAATACCAATTACAGTCATCTTCACTTTCTTCATCCACGAAACAGGAGCCAGTGGAAGTGATTCAGGGTGAACTTATTGATGATCACAGCCCATTAGCCTCATCAGATTACCTCCTGTTATGTGACTATGAACTTGATTTCAATTACATGGGGCATGTTACTACGCTATTTTAG 843 0.4021 MENQLSKERRAMEEELVRGREIANQLLEVCVHRSNTHHHEDVHMLPFIEDLVRKVLCSFTNTLLLLNTDNDVTNEVSMPLTVKDTPSFAKCPKPQHTDEVCKSFLQTEKRRGYYKKKSSAPTWVTNSSILMEDGYVWRKYGQKITTNAKYFRSYYRCTHKHDKGCPAIKQVQRIQEDPPLYRTTYYGNHNCKSYSSSDIIMESASPSGSSVFLSFSNTLPTKQQYQLQSSSLSSSTKQEPVEVIQGELIDDHSPLASSDYLLLCDYELDFNYMGHVTTLF* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0831 280 Pfam WRKY DNA -binding domain 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0831 280 SUPERFAMILY WRKY DNA-binding domain 126 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu5g0831 280 ProSiteProfiles WRKY domain profile. 126 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0831 280 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 279 - -
Pvu5g0831 280 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 279 IPR044810 GO:0003700
Pvu5g0831 280 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0831 280 Gene3D WRKY domain 116 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0831 Pvu-Chr5 18435912 18437363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0831 1 193 WRKY Transcription Factor Family AT3G56400 34.694 4.15e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu5g0831 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0831 - - gmx:102659367 347.051