Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0830 ATGGAGAATCAGATTCCAAATGGCAAAAGGGCAATGGAAGAAGAGCTGAACAGAGGGCGTGACATGGCAAATCAGTTGCTTGAAGTTCTTGCTCATGATATATCAATCACTCATCTTGAAAAGGAAGAAGGGTCAAAGTCAGTGTTACCATTTGTTGAAGATCTTGTGCGCAAGGTTCTGTGTTCATTCACAAATACCCTTTTACTTTTGAACTCCAGCAACGATGTTTCCCATGAGGTGGCCACGTCTATCACTCTCAGAGATGTCTCTTCGTCCACCAGTTCCCCAGAGAAGTTGGAGTCTGTGGATGAAACTTGCAAGAGTCGCAATATTCTCAGCACTGAAAAACTAAGAAGAGGCTACAAGAGAAAATCAATTGCGCCAACTTGGGGGAAGGACAGCTGCATACTGGTTGAAGATGGCTATGTATGGAGAAAATATGGACAAAAAATGACAATGAACGCCAAATACCTAAGGAGCTACTACAGGTGCACTCACAAGAATGATCAGGGGTGCCAAGCAATGAAACAGGTGCAGAGAATTGAAGATGATCCTCCTTTGTACCGAACAAACTATTATGGCCATCACACTTGTAAAAGCCATATGAATCCAGAGATTGTTTTGGAACCTCTTTCTCTCTCTGCATCTTCCACATTACTTAGCTTTAATAACAGCCTTCATAGCAAACAACAAAACCCGTTTCCCTCATCACTACTTGCTTCAAACAAGCATGAGCTCATGGAAGTGATTCACGATGAACATAGTGCTCAGAACCAATTATCCTCTCTCCAAGACTTCTTACTGTATGATTGTGAAGTTTATTGCGATTATTCAAGGCGTGTGGCTATGCTATCATCCACTGAACCCCTTGAATTTGAGAATGCCTTTATCAGCACTTTGGATTTTGCTGCCTAG 915 0.4219 MENQIPNGKRAMEEELNRGRDMANQLLEVLAHDISITHLEKEEGSKSVLPFVEDLVRKVLCSFTNTLLLLNSSNDVSHEVATSITLRDVSSSTSSPEKLESVDETCKSRNILSTEKLRRGYKRKSIAPTWGKDSCILVEDGYVWRKYGQKMTMNAKYLRSYYRCTHKNDQGCQAMKQVQRIEDDPPLYRTNYYGHHTCKSHMNPEIVLEPLSLSASSTLLSFNNSLHSKQQNPFPSSLLASNKHELMEVIHDEHSAQNQLSSLQDFLLYDCEVYCDYSRRVAMLSSTEPLEFENAFISTLDFAA* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0830 304 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 296 - -
Pvu5g0830 304 SUPERFAMILY WRKY DNA-binding domain 136 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu5g0830 304 Pfam WRKY DNA -binding domain 139 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0830 304 ProSiteProfiles WRKY domain profile. 133 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0830 304 SMART WRKY_cls 138 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0830 304 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 296 IPR044810 GO:0003700
Pvu5g0830 304 Gene3D WRKY domain 130 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0830 Pvu-Chr5 18328284 18331020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0830 22 200 WRKY Transcription Factor Family AT3G56400 40.437 4.30e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu5g0830 WRKY 1.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0830 - - var:108332714 492.656