Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0829 ATGGAGAATCAGCCTTCAAATGGAAGAAAAGCAATGGAAGAAGAGCTCAACAAAGGGCGTTACACAGCAAACCAGTTACTCCAAATACTTGTTCATAAATCCAACACTCGTCATAGAGATGCAGAAGTAGAAGGGTTAGTGTTACCATTTGTTGAAGATCTTGTTCGCAAGGTACTGAGATCGTTCTCAAATACCCTTTTGCTGTTGAACACTCATAGTGATATTTTCGATGAGGTTGTTATGCCTACCACTATCAATGATGTCTCTTCGTCCCTCAAATGCCCTAATCTTGAGGATAAGGATGGGGTTTGCAAGGGTTCCATCAACGCTAAAAGACGAAGAGTGTGTCGCAAGAGAAATGCACCAACATGGGAGAAGAACAGCTCACATCTCATGGAAGATGGCTATATATGGAGAAAGTATGGACAGAAAATGACCATGAATACAAAATACCTCAGGAGCTACTACAGATGCACTCACAAGTATGATCAGGGTTGTCCAGCAACCAAACAGGTTCAAAGGATTCAAGAGGACCCTCCATTGTACCGAACAACTTATTATGGTCATCACAATTGCAAAATCTCTTTGGGTCCAGAAATAATTTTGGAACCAGCTTCTTCTTCTGACTCTTCTATGTTCCTTAGCTTCAGTACCACCTTCCCAACCAAAGAAGAATACCAATTTTCATCATCACTTTTTTCATCCACAAAACAGGAGCCTATGGAAGGGATTCCGGATGACTGTGGTATGCACAACCAACTACCCTCATCAGATTACCATCTGTTAGATGACTATGAACTTGATTTCAATTGTTTGAGGTATGATACTATGCAGTCTATGCTATCCTCCACTGAATCTGTTCAATTTGATAAAGTTTATGGGAGTGGTATGGATTTTGATGGCTAG 906 0.4073 MENQPSNGRKAMEEELNKGRYTANQLLQILVHKSNTRHRDAEVEGLVLPFVEDLVRKVLRSFSNTLLLLNTHSDIFDEVVMPTTINDVSSSLKCPNLEDKDGVCKGSINAKRRRVCRKRNAPTWEKNSSHLMEDGYIWRKYGQKMTMNTKYLRSYYRCTHKYDQGCPATKQVQRIQEDPPLYRTTYYGHHNCKISLGPEIILEPASSSDSSMFLSFSTTFPTKEEYQFSSSLFSSTKQEPMEGIPDDCGMHNQLPSSDYHLLDDYELDFNCLRYDTMQSMLSSTESVQFDKVYGSGMDFDG* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0829 301 ProSiteProfiles WRKY domain profile. 127 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0829 301 Gene3D WRKY domain 119 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu5g0829 301 SUPERFAMILY WRKY DNA-binding domain 128 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu5g0829 301 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0829 301 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 291 - -
Pvu5g0829 301 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 291 IPR044810 GO:0003700
Pvu5g0829 301 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0829 Pvu-Chr5 18309095 18311322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0829 51 192 WRKY Transcription Factor Family AT3G56400 40.940 2.70e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu5g0829 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0829 - - gmx:102663141 407.142