Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0807 ATGGTTAGAAGTCTGTCCGAGTACTCTTTTACGGATTCCTACTCCTTCATTCTCTGCAATTCAAACTCTCTGATTAGATTCAGGGCTTGCATTCCCCGAATCCTCTCATCACCTTCATATTCTGCCTTGAGAGATCTTTCATATAACAACTTCACCGAAGAAAGTTCCGATGCATGCACATACACTGACACTGAAAAAGTGAACTTATTTGCAAGCTTCCCAAAGAGCAAAATGGGACCTGTTACTTGTCTGACAACTGGAAACTGTTCAAAAACCTTTGAATCTTTCCATATAAATTGTGGTGGGGAAGGAGTGACCGATGAAAATATTGTGTATGATGATGACCGAGAAGCATTAGGGGCAGCAACATCCGAGTACAAAGCAAATTGGGCAATTAGCAATACCGGTCATTTCTTGGGTGATTTTAATACTGAATCGTATATCCAGCAAATTCAAAATGGGTTTTCCATGCCTAGATTGTATCAGACTGCACGTGTATCCCCCATTTCTTTGACTTATTATGGAACGTGTCTGGAAAATGGAGTCTACACGGTATTGCTGCATTTTGCAGAGATCATGTTCACTGATGATACCACATATAGAAGCCTAGGAAGACGCATATTTGATGTTTACGTTCAGGGAAAGCTAGAATTGAAGGATTTCAATATTGCAAATGAAGCAGGAGGAGTTGGGAAGAAAATTACAAAAACAATTTCAACTATTGTGAGTAATAAGTCTTTAGAGATTCGTTTTTATTGGGCTGGAAAAGGAACAACTGATATCCCAAATAAATCAGTATATGGCCCTCTTATATCAGCTATATCTGTCACTCGAGTAAAGTCAGGTAGCATGAGTATAGGGGTTATAATTGGGATAACAGTTGCTGCAATTGTATTTGTCATCCTTATTGTACTTGGCTGGAGACTTCATACTGGGAAAAGAAATTCATTGGCAAAAGAGTTAAAGCATTTAAATTTGCAAATGGGTATGTTTACTATGCGTCAAATCAAAGTTGCAACAAATAACTTTGACATTTCCAATAAGATTGGAGAAGGAGGCTTCGGTCCTGTCTACAAGGGTACTTTATCAGATGGCACAATAATAGCAGTTAAGAAGCTTTCATCAAAGTCAAAGCAAGGGAACCGTGAATTTATAAATGAGATAGGGTTGATTTCAGCTTTGCAACACCCTTGTCTTGTTAAACTTTATGGTTGTTGTGTTGAGGGAGATGAGTTGTTGCTGGTATACGAATATATGGAAAACAATAGCCTTGCACATGCTTTATTTAGAAATGGAGAATCTTGTTTGCAATTGGATTGGCCAACCAGGTATAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCTTTCCTACATGAAGAATCAAGATTAAAAGTTGTTCATAGGGACATAAAGGCTACTAATGTGTTGTTAGACAAAGACTTGAACCCAAAGATATCCGATTTTGGTCTTGCAAAGCTTGATGATGAGGACAATACTCACATAAGCACAAGAATAGCTGGGACTTATGGATATATGGCGCCAGAGTATGCCATGCATGGTTATTTAACTGATAAAGCAGATGTGTATAGTTTTGGAGTGGTTGCCTTAGAAATTGTGACTGGAAAGACCAATACCATCCATCGACCGAAGCAAGAAGCATTGCTTCTTTTAGATTGGGCACATTTAGTGAAAGAGAAAGGGAATCTGATGGAGCTAGTTGATAGAAGGTTAGGATCAAATTTCAATGAAAAAGAGGTAATGATGATGATAAAAGTGGGTCTTCTGTGCACAAATACCACTGCAAACCTTAGGCCTAGCATGTCATCGGTGCTTAGCATGCTTGAAGGAAAAACTGTGATTCCAGAATTTATTTCAGATTCATCTGAAGTAATGGATGAAATGAAGCTAGAGGCTATGAGACAATATTACTCTCAAATGGAAGAAAATGAGAGAAGTGAAACACATACAACTCATAGTTCATCAAAAGATGGGCCATGGACTGCTTCATCTTCATCAGCTGCAGACCTATATCCTCTCCATATGGATTCTTCTTATTGGGAGAAAAGAAATTAG 2073 0.383 MVRSLSEYSFTDSYSFILCNSNSLIRFRACIPRILSSPSYSALRDLSYNNFTEESSDACTYTDTEKVNLFASFPKSKMGPVTCLTTGNCSKTFESFHINCGGEGVTDENIVYDDDREALGAATSEYKANWAISNTGHFLGDFNTESYIQQIQNGFSMPRLYQTARVSPISLTYYGTCLENGVYTVLLHFAEIMFTDDTTYRSLGRRIFDVYVQGKLELKDFNIANEAGGVGKKITKTISTIVSNKSLEIRFYWAGKGTTDIPNKSVYGPLISAISVTRVKSGSMSIGVIIGITVAAIVFVILIVLGWRLHTGKRNSLAKELKHLNLQMGMFTMRQIKVATNNFDISNKIGEGGFGPVYKGTLSDGTIIAVKKLSSKSKQGNREFINEIGLISALQHPCLVKLYGCCVEGDELLLVYEYMENNSLAHALFRNGESCLQLDWPTRYKICVGIARGLAFLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDDEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVTGKTNTIHRPKQEALLLLDWAHLVKEKGNLMELVDRRLGSNFNEKEVMMMIKVGLLCTNTTANLRPSMSSVLSMLEGKTVIPEFISDSSEVMDEMKLEAMRQYYSQMEENERSETHTTHSSSKDGPWTASSSSAADLYPLHMDSSYWEKRN* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0807 690 SMART serkin_6 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0807 690 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 68 653 - -
Pvu5g0807 690 Gene3D - 95 280 - -
Pvu5g0807 690 Gene3D Phosphorylase Kinase; domain 1 306 418 - -
Pvu5g0807 690 ProSiteProfiles Protein kinase domain profile. 343 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0807 690 SUPERFAMILY Protein kinase-like (PK-like) 327 617 IPR011009 -
Pvu5g0807 690 CDD STKc_IRAK 349 616 - -
Pvu5g0807 690 Gene3D Transferase(Phosphotransferase) domain 1 419 628 - -
Pvu5g0807 690 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 68 653 - -
Pvu5g0807 690 Pfam Malectin domain 96 274 IPR021720 -
Pvu5g0807 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pvu5g0807 690 Pfam Protein tyrosine and serine/threonine kinase 345 613 IPR001245 GO:0004672|GO:0006468
Pvu5g0807 690 MobiDBLite consensus disorder prediction 646 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0807 Pvu-Chr5 16342492 16350483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0807 12 672 Receptor kinase-like Gene Family AT1G53430 54.440 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0807 PK_Tyr_Ser-Thr 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0807 - - pvu:PHAVU_005G078100g 1349.73