Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0802 TATTTAACAGGAAATCTTTTCACTGGACCACTGCCCAACTGGATAGACAGGCCAGATTATACCGATCTCTCATATAACAATTTGAGCATCGAAAACCCAGAGCAATTGACATGTCAACAGGGAAGTGTGAACTTGTTTGCATCATCTTTAAAGGGAAATGACTCGGGAATGGTTTCATGTTTAGGCCACATTAACTGTCCTAAAACTTTATACTCTCTCCATGTAAATTGTGGAGGGAAGTTAATATCTAATGGAAACATAAAATATGATGATGATTCACAAGAAGCTGGCCCAGCAAGATTTCGTCGAACAGGATCAAATTGGGTATTTAGCAACACTGGTCATTTCTTTGATAGTGGTCGTGTGGACTACTATACTTGGTCTAATACAACAAAGCTTGACATCAACAATGGCGAATTATATATGGATGCACGTGTTTCTCCCCTTTCTCTCACATATTATGCATTTTGCATGGGAAATGGAAGCTACACAATAAGCCTTCATTTTGCAGAAATAATGTTCACTGATGATCAAACATATAGCAGCTTGGGAAGACGTGTATTTGACATCTATGTTCAGAGAAAGTTGGTGCTGAAGGATTTCAATATTGCAAAAGAAGCAGGAGGAGTTGGTAAAGCAATCATAAAAAAGTTCACTGCTACAGTAAATAGCAGTACCTTAGAGATTCGCTTGCAGTGGGCTGGAAAAGGGACTACTGGTATACCATTTGGATCAGTTCATGGTCCTCTCATATCTGCTATATCTGTTGATCCTGATTTTACACCCCAAGAGGAAAATAAAGATGGTGTACCTAAGCATTATATTGTTGCAATTATAACTGGAGCACTTGTTATCATCATAATATTTGCCATAGCTTGGTGGAGAGGATGTTTAAGAAGAAAGGTATCGTTAGAAAAAGAATTAATGGGTGTAGATTTCCAAACTGGCTTATTTAGCTTAAGAAAAATCAAAGCTGCAACTAAAAACTTTGATATTAGCTTCAAGATTGGAGAAGGAGGTTTTGGTCCTGTATACAAGGGTGTTCTCTCAGATGGCACGGTAATAGCAGTTAAACAACTTTCTTCTAAATCAAAACAAGGGAATCGTGAGTTTGTAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCTTGTCTAGTTAAACTATATGGTTGTTGTATGGAGGGAAATCAGTTGATGCTAATATATGAATACATGGAAAACAACAGTCTTGCTCGTGCTTTATTTGAACCAGAAAAATCTGAATTGAAGCTGAATTGGTCAACAAGGCAAAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCTTACCTCCATGGAGAGTCAAGGCTAAAGATAGTTCACAGGGACATCAAGGCCACTAATGTGTTACTAGACAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAAGAGGGCAACACACACATAACTACCAGAGTAGCTGGCACTTATGGATACATGGCTCCAGAATATGCAATGCATGGTTATTTAACTGATAAAGCAGATGTTTATAGTTTTGGTATTGTTGCACTAGAAATTGTTAGCGGAAAAAGTAATAACATGAATTGGCCAAAGGAAGGATGTTTCTCTCTCGTTCATTTGGTGCATCTCTTGAAAAAACAAAGTGATCTAATGGACCTTGTTGATGAGAGGTTGGGTAAGGATTTCAGAAAAGATGAAGTAGTGGTAATGATTAATGTGGCTCTATTATGTACGCAAGTTTCTCCAATGCATAGACCCACCATGGCTTCTGTTGTATGCATGCTTGAAGGAAAAACTAAAGTTCCAGAGGTGGTAGTAGATACAAGTGAAATATTAGATGGAAAGAAGTTGGAGATGCAACAATATTACAGTATGAGAAAGAAAAATATAACTCAAGAAGAGAGCATCTCAATGGGTGAAACTTCAACATTTATGTCTGATATAGGTCTATATTCTATCAACATGGATTCTTCTTTCCAAGAGAAGAGTCATTAG 2013 0.3751 YLTGNLFTGPLPNWIDRPDYTDLSYNNLSIENPEQLTCQQGSVNLFASSLKGNDSGMVSCLGHINCPKTLYSLHVNCGGKLISNGNIKYDDDSQEAGPARFRRTGSNWVFSNTGHFFDSGRVDYYTWSNTTKLDINNGELYMDARVSPLSLTYYAFCMGNGSYTISLHFAEIMFTDDQTYSSLGRRVFDIYVQRKLVLKDFNIAKEAGGVGKAIIKKFTATVNSSTLEIRLQWAGKGTTGIPFGSVHGPLISAISVDPDFTPQEENKDGVPKHYIVAIITGALVIIIIFAIAWWRGCLRRKVSLEKELMGVDFQTGLFSLRKIKAATKNFDISFKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPCLVKLYGCCMEGNQLMLIYEYMENNSLARALFEPEKSELKLNWSTRQKICVGIARGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEGNTHITTRVAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNNMNWPKEGCFSLVHLVHLLKKQSDLMDLVDERLGKDFRKDEVVVMINVALLCTQVSPMHRPTMASVVCMLEGKTKVPEVVVDTSEILDGKKLEMQQYYSMRKKNITQEESISMGETSTFMSDIGLYSINMDSSFQEKSH* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0802 670 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 48 647 - -
Pvu5g0802 670 Pfam Malectin domain 72 254 IPR021720 -
Pvu5g0802 670 Pfam Protein tyrosine and serine/threonine kinase 334 599 IPR001245 GO:0004672|GO:0006468
Pvu5g0802 670 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 647 - -
Pvu5g0802 670 Gene3D - 70 258 - -
Pvu5g0802 670 Gene3D Phosphorylase Kinase; domain 1 297 405 - -
Pvu5g0802 670 SMART serkin_6 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0802 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Pvu5g0802 670 ProSiteProfiles Protein kinase domain profile. 330 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0802 670 CDD STKc_IRAK 336 603 - -
Pvu5g0802 670 Gene3D Transferase(Phosphotransferase) domain 1 406 615 - -
Pvu5g0802 670 SUPERFAMILY Protein kinase-like (PK-like) 314 602 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0802 Pvu-Chr5 16063653 16074939 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0802 1 653 Receptor kinase-like Gene Family AT1G53420 53.243 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0802 PK_Tyr_Ser-Thr 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0802 - - gmx:100786496 1162.13