Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0800 TATTTAACTGGAAACCTTTTCACTGGACCACTACCCAACTGGATAGATAGGCCAGACTATACTGATCTCTCATATAACAATTTGAGCATCGAAAACCCAGAGCAATTGACATGTCAACAGGGAAGCGTGAACTTGTTTGCATCATCGTTGAAGGGAAATGACTCGGGAATGGTTTCATGTTTAGGCAACAATAACTGTCCTAAAACTTTATACTCTCTCCATGTAAATTGTGGAGGGAAGTTAATATCTAATGGAAACATAAAATATGATGATGATTCACAAGAAGCTGGCCCAGCAAGATTTCGTCGAACAGGATCAAATTGGGTATTTAGCAACACTGGTCATTTCTTTGATAGTGGTCGTGTGGACTACTATACTTGGTCTAATACAACAAAGCTTGACAACAACAATGACGAATTATATATGGATGCACGTGTTTCTCCCCTTTCTCTCACATATTATGCATTTTGCATGGGAAATGGAAGCTACACAATAAGCCTTCATTTTGCAGAAATAATGTTCACTGATGATCAAACATATAGCAGCTTGGGAAGACGTGTGTTTGACATCTATGTTCAGAGAAAGTTGGTGCTGAAGGATTTCAATATTGCAAAAGAAGCAGGAGGAGTTGGTAAAGCAATCATAAAAAAGTTCACTGCTACAGTGAATAGCAGTACCTTAGAGATTCGCTTGCAGTGGGCTGGAAAAGGGACTACTGGTATACCATTTGGATCAGTTCATGGTCCTCTCATATCTGCTATATCTGTTGATCCTGATTTTACACCCCAAGAGGAAAATAAAGATGGTGTACCTAAGCATTATATTGTTGCAATTATAACTGGAGCACTTGTTATCATCATAATATTTGCCATAGCTTGGTGGAGAGGATGTTTAAGAAGAAAGGTATCATTACAAAAAGAATTAATGGGTGTAGATTTCCAAACTGGCTTATTTAGCTTAAGAAAAATCAAAGCTGCAACTAAAAACTTTGATATTAACTTCAAGATTGGAGAAGGAGGTTTTGGTCCTGTTTACAAGGGTGTTCTCTCAGATGGCACGGTAATAGCAGTTAAACAGCTTTCTTCTAAATCAAAACAAGGGAATCGTGAGTTTATAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCTTGTCTAGTTAAACTTTATGGTTGTTGTATGGAGGGAAATCAGTTGATGCTAATATATGAATACATGGAAAACAACAGTCTTGCTCGTGCTTTATTTGAACCAGAAAAATTTGAATTGAATCTGAATTGGTCAACAAGGCAAAAGATATGTGTTGGTATTGCTAGAGGTTTGGCTTACCTCCATGGAGAGTCAAGGCTGAAGATAGTTCATAGGGACATCAAGGCCACTAATGTGCTACTAGACAAAGATCTCAACCCAAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAAGATGGCTATACACACATAACGACCAGAGTAGCTGGCACTTATGGATACATGGCTCCAGAATATGCAATGCATGGTTATTTATCTGGTAAAGCAGATGTGTATAGTTTTGGTGTTGTTGCGCTAGAAATTGTTAGCGGAAAGAGTAATAGCATGAATTGGCCAAAGGAAGGATGTTTCTCTCTCGTTGATTTGGTGCATCTCTTGAAAGAACAAGGTGATCTAATGGACCTAGTTGATGAAAGGTTGGGTAAGGATTTCAAAAAAGATGAAGTAATAGTAATGATTAATGTGGCTCTATTATGTACACAAGTTTCTCCAATGCACAGACCCACCATGGCTTCAGTTGTATGCATGCTTGAAGGAAAAACTAATGTTCAAGAAGTGGTGTTAGATACAAGTGAAGTCATGGATGGAAAGAAGTTGGAGATGCAACAATATTACAATATAAGAGACAAAAATATAACTGAAGAAACTCAAGAAGAGAGCATCTCAATGAGTGAAACTTCAGCATTTATGTCTGATACAGATTTATATTCTATCAACATGGATTCTTCTTTCCTAGAGAAGAGTCATTAG 2022 0.3754 YLTGNLFTGPLPNWIDRPDYTDLSYNNLSIENPEQLTCQQGSVNLFASSLKGNDSGMVSCLGNNNCPKTLYSLHVNCGGKLISNGNIKYDDDSQEAGPARFRRTGSNWVFSNTGHFFDSGRVDYYTWSNTTKLDNNNDELYMDARVSPLSLTYYAFCMGNGSYTISLHFAEIMFTDDQTYSSLGRRVFDIYVQRKLVLKDFNIAKEAGGVGKAIIKKFTATVNSSTLEIRLQWAGKGTTGIPFGSVHGPLISAISVDPDFTPQEENKDGVPKHYIVAIITGALVIIIIFAIAWWRGCLRRKVSLQKELMGVDFQTGLFSLRKIKAATKNFDINFKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCMEGNQLMLIYEYMENNSLARALFEPEKFELNLNWSTRQKICVGIARGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEDGYTHITTRVAGTYGYMAPEYAMHGYLSGKADVYSFGVVALEIVSGKSNSMNWPKEGCFSLVDLVHLLKEQGDLMDLVDERLGKDFKKDEVIVMINVALLCTQVSPMHRPTMASVVCMLEGKTNVQEVVLDTSEVMDGKKLEMQQYYNIRDKNITEETQEESISMSETSAFMSDTDLYSINMDSSFLEKSH* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0800 673 SMART serkin_6 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0800 673 Gene3D Transferase(Phosphotransferase) domain 1 406 624 - -
Pvu5g0800 673 SUPERFAMILY Protein kinase-like (PK-like) 314 602 IPR011009 -
Pvu5g0800 673 ProSiteProfiles Protein kinase domain profile. 330 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0800 673 Pfam Protein tyrosine and serine/threonine kinase 333 599 IPR001245 GO:0004672|GO:0006468
Pvu5g0800 673 Pfam Malectin domain 72 254 IPR021720 -
Pvu5g0800 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Pvu5g0800 673 Gene3D Phosphorylase Kinase; domain 1 297 405 - -
Pvu5g0800 673 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 48 651 - -
Pvu5g0800 673 CDD STKc_IRAK 336 603 - -
Pvu5g0800 673 Gene3D - 70 258 - -
Pvu5g0800 673 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0800 Pvu-Chr5 15960461 15971598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0800 1 652 Receptor kinase-like Gene Family AT1G53420 52.115 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0800 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0800 - - gmx:100786496 1176