Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0768 ATGGCTGACGTGGCAGGTCTAGTTGAGGCATCGGGATCAAGATTCACTTCATTGGAACTTATTGGGCAGGGATCGTTTGGAGACGTCTATAAAGCGTTTGACAAGGAGCTCAACAGAGAAGTCGCCATCAAAGTAATCGACTTGGAAGAATCAGAGGATGAAATTGATGATATCCAGAAGGAAATTTCTGTTTTGTCCCAATGTCGATGTCCATACATTACTGAGTATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGTTCAGTTGCCGATCTACTCCAACCAGGTCATCCCCTTGATGAAATGTCAATTGCTTGCATTCTACGTGACTTGCTGCATGCTGTTGATTATCTACACGCTGAAGGGAAAATTCACAGAGATATTAAAGCTGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTAGCAGATTTTGGTGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACGCCGTTTTGGATGGCACCTGAGGTTATTCAGAATACTGATGGGTATAATGAGAAGGCAGATATTTGGTCTTTGGGAATCACTGCTATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCACCCGATGAGAGTGCTTTTCATCATACCCCGCGAGAGTCCTCCACAGCTAGATGATCATTTTTCCCGTCCAATGAAAGAATTTGTCTCATTGTGCTTAAAGAAGGTTCCCGCTGAGAGGCCAAGTGCTAAGGAACTTTTGAAGGACCGTTTTATTCGGAATGCTAGGAGGAGTTCAAAGCTTGCAGAAAGAATAAGAGAACGTCCAAGATACCAAATAAAGGAAGAAGATCAGGAAACACCTAGAAATGTTTCAAGAGGGATGAGGGAGGCATCAGATACTGTAAAAGTGGCTAGAGATGTAAGAGGTGAAGAAAATAATCGACCCAGTGATCAGGGTAAAACCCTGAAAAGTGCTGGATGGGACTTCAATATTGGTGGATCACAGGGTACTGGAACCTTTCGAAGTGTGTCTCGACCACCTCAGTTTAGAGAGAAGAAAGCTGAAGGTTCACCTAATCAGCTAACCCAAAGAAAAGCTCCAGAGAGTGGTTATCAAGGGGGATCTGCCAATCGAAGTGCACTTAATGAGTCACTTGAAAGTTCCTCTGGAAGAGATCTTAGAGTTCCCCACCATGATGAGCATCTGGACATTGAAGATGATGATTTATCTGGAAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGGTCAAGGTCATCTGTATTCTCTGACCAGAGCCCTCAATATAGTAGCGGCTATTCTTCTTTTGATGATGCTTCTACAAGTGGGACTGTTGTTTTACGTGGCCAGCATGATGAGCCTGGTTCTCCACAGCCACTAAGGTCTCGACTGGGACTGAATGACAGAAATTCAAATTCCTCAACGGAAGACAGTGCGGCAAATCTTGCTGAGGCAAAGGCTGCTTTGCAAGGAGGGCTCAGGAGAGTGAGTTCTCGAGAAAGATTGGCCTGGGGAAAAAACAACAATGAAAGACAGGAAGACAAGAAAGATGGAAAGGCCAGCAGCTCTGATTCTTCAAGACTAAGTGTCGAACGTGACTCACACAGGGGCATGTCAAGATCACATCATGCTAATAATGAAGGAAGTGCTAAAATAATGTCATCCTCAGTGCCATTATCTGCTTTACTTATTCCTTCATTAAAAGAGGTCATTGCTGATGATCCAGAAGGGTCAGTTGTGCGGGCAGTTATCAATTCTTTTATAAACATGGAGGGCTCAAAACCTAAATCCTGTGATGCTCTTCTCAAACAGTTGCTTCAGCGATTGGCAAGTTCGAAGGAAGATTCACTGAAGGACCTGCAGGGACTAGCAGGCCAACTATTCAGCAAGACCAAGTCCACCGAAGAAACTCGAAATGCAGAGGCTGATAACAGGAAAAAACAACAAAACAAGGAACATCATCCTAATAGCAATTTAAGTCCACTAGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCGCGGGATCTGAACTCATCTTGA 2097 0.4344 MADVAGLVEASGSRFTSLELIGQGSFGDVYKAFDKELNREVAIKVIDLEESEDEIDDIQKEISVLSQCRCPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQPGHPLDEMSIACILRDLLHAVDYLHAEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRESPPQLDDHFSRPMKEFVSLCLKKVPAERPSAKELLKDRFIRNARRSSKLAERIRERPRYQIKEEDQETPRNVSRGMREASDTVKVARDVRGEENNRPSDQGKTLKSAGWDFNIGGSQGTGTFRSVSRPPQFREKKAEGSPNQLTQRKAPESGYQGGSANRSALNESLESSSGRDLRVPHHDEHLDIEDDDLSGNGSGTVVIRSPKGSRSSVFSDQSPQYSSGYSSFDDASTSGTVVLRGQHDEPGSPQPLRSRLGLNDRNSNSSTEDSAANLAEAKAALQGGLRRVSSRERLAWGKNNNERQEDKKDGKASSSDSSRLSVERDSHRGMSRSHHANNEGSAKIMSSSVPLSALLIPSLKEVIADDPEGSVVRAVINSFINMEGSKPKSCDALLKQLLQRLASSKEDSLKDLQGLAGQLFSKTKSTEETRNAEADNRKKQQNKEHHPNSNLSPLARFLLSRWQGQTSRDLNSS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0768 698 MobiDBLite consensus disorder prediction 337 353 - -
Pvu5g0768 698 Coils Coil 649 669 - -
Pvu5g0768 698 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 696 - -
Pvu5g0768 698 MobiDBLite consensus disorder prediction 280 496 - -
Pvu5g0768 698 MobiDBLite consensus disorder prediction 651 670 - -
Pvu5g0768 698 CDD STKc_MST3_like 13 287 - -
Pvu5g0768 698 MobiDBLite consensus disorder prediction 399 417 - -
Pvu5g0768 698 Gene3D Transferase(Phosphotransferase) domain 1 11 304 - -
Pvu5g0768 698 MobiDBLite consensus disorder prediction 280 301 - -
Pvu5g0768 698 SUPERFAMILY Protein kinase-like (PK-like) 13 289 IPR011009 -
Pvu5g0768 698 MobiDBLite consensus disorder prediction 645 680 - -
Pvu5g0768 698 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 696 - -
Pvu5g0768 698 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0768 698 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0768 698 MobiDBLite consensus disorder prediction 423 464 - -
Pvu5g0768 698 MobiDBLite consensus disorder prediction 307 326 - -
Pvu5g0768 698 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pvu5g0768 698 MobiDBLite consensus disorder prediction 516 559 - -
Pvu5g0768 698 MobiDBLite consensus disorder prediction 516 569 - -
Pvu5g0768 698 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0768 698 MobiDBLite consensus disorder prediction 480 496 - -
Pvu5g0768 698 MobiDBLite consensus disorder prediction 364 398 - -
Pvu5g0768 698 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0768 Pvu-Chr5 13119653 13130536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0768 1 695 MAP Kinase Kinase Kinase Kinase AT3G15220 64.622 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pvu5g0768 Pkinase 1.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0768 K08838 - gmx:100815042 1143.64