Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu5g0732 | ATGGCCGAGCTCACAGAACTGTTCCCATTGGGCCAACAATTCGATGGTTTGATACGCATGTGTGTGCAGGCCATCTCTTATGATCTTCCAACTCTCACCACTGTTCTATTCGTACTCACATTGTTGTTCTTCATCCTACACCGAATTCTCAACGGGATGTTCTTCTGGGTAATGGAAATGGAGTCAAATGAACATGATCTTGAAGAAGGAAGCACTCATTTGAGAAACTACGGAGAGCCCTCTCAGCATGTTACCATCTTTCATGCTCTTGTTCACACCAATTTGCATGCTTGGACATTGGTGACTGCATTTGAAAGAGTTCATTCCAAAATAGGGCAAAATCTTAGAGCTTCCAAGAAATTACCCCCCTTGGTAAACTATGGAATGCATGGTAAAGCAAGAAGTTGTGGGGAATGTGCCATTTGCTTGGAAGAATTCAGAGTGAATCAATTATGTCAAGTTTTTCCTGTGTGCAAACACCTTTTTCATTCGGATTGCATAGACCACTGGTTGCAGAAGAAATTAAACTGCCCCATATGTCGTGGTTCTGTATAG | 555 | 0.4234 | MAELTELFPLGQQFDGLIRMCVQAISYDLPTLTTVLFVLTLLFFILHRILNGMFFWVMEMESNEHDLEEGSTHLRNYGEPSQHVTIFHALVHTNLHAWTLVTAFERVHSKIGQNLRASKKLPPLVNYGMHGKARSCGECAICLEEFRVNQLCQVFPVCKHLFHSDCIDHWLQKKLNCPICRGSV* | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu5g0732 | 184 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 103 | 184 | IPR013083 | - | |
Pvu5g0732 | 184 | Pfam | Ring finger domain | 138 | 181 | IPR001841 | - | |
Pvu5g0732 | 184 | PANTHER | RING FINGER DOMAIN-CONTAINING | 16 | 184 | - | - | |
Pvu5g0732 | 184 | ProSiteProfiles | Zinc finger RING-type profile. | 139 | 181 | IPR001841 | - | |
Pvu5g0732 | 184 | SMART | ring_2 | 139 | 180 | IPR001841 | - | |
Pvu5g0732 | 184 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 16 | 184 | - | - | |
Pvu5g0732 | 184 | SUPERFAMILY | RING/U-box | 138 | 183 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu5g0732 | Pvu-Chr5 | 11640807 | 11641361 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu5g0732 | 24 | 181 | C3H Transcription Factor Family | AT1G53010 | 32.317 | 2.61e-19 | 79.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu5g0732 | - | - | pvu:PHAVU_005G070700g | 373.244 |