Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0727 ATGGAAGAGGAAAGCACGGATTCGCGAAAGCAATCGAGGCTCGCGATTATGGAACTCGCCAACATGATAAGCGTTCCAATGGCCCTAAACGCTGTCGTTCGCCTCAACGTCGCCGACGCCATCTGGAACGGCGGCGCCAACGCCCCCCTCTCCGCCGCCCAGATCCTCCCCCGCATCCTCCCTGTCGGCGACGGCGACGCCGAGAACCTCCAGCGCCTCCTTCGCATCCTCACCAGCTACGGCGTCTTCCACGAACACCTCGCCGCCGGCGAACGCAAGTACTCCCTGACCGACGTCGGCAAAGCGCTTGTCACCGACGAACAAGGCCTCTCCTACGGGGCTTACGTGCTCCAACACCACCAGGACGCGCTGATGCGAGCGTGGACATTGGTTCACGAGGCAGTGGTGGACCCTACGAAGGAGCCCTTCGAGAGGGCGAACGGGGAGGGAGCGTATGCGTATTACCTGAAGCAGGCAGAGATGAACGAGCTAATGGTGAAGGCGATGTCAGGGGTGTCAGTGCCCTTTATGAGGGCCATGTTGGAGGGCTACGATGGCTTCCAAGGTGTGGAGAGGCTGGTGGACGTGGGTGGTAGTGGCGGTGACTGCCTCCGCATGATCCTGCTCAAATACCCCAACATCAAGGAAGGGATCAACTTCGACCTCCCTGAAGTTGTGGCCAAAGCACCACCAACCCCATGTGTAACCCATGTGGGTGGTGACATGTTCAAGTCTATTCCCCAAGGAGATGCTATCTTCATGAAGTGGGTGCTAACAACATGGACGGACGAGGAAATAAAGCAGATAATGCAGAACTGTCACAAGGCACTTCCTGAGGGAGGGAAACTGATAGCTTGTGAGCCAGTACTGCCAGAGCACTCGGATGAGAGTCACAGAACAAGGGCGTTGCTTGAGGGTGACATTTTCGTGATGACAATCTACAGAGCCAAGGGGAAGCACAGGACTGAAGAACAGTTCAGGCAGTTAGCCAATGATGCAGGTTTCCCTCGTTTCAGAGCCTTCAACGTTGACCATTTCTACACTGTTCTTGAGTTTCAGAAATGA 1065 0.5615 MEEESTDSRKQSRLAIMELANMISVPMALNAVVRLNVADAIWNGGANAPLSAAQILPRILPVGDGDAENLQRLLRILTSYGVFHEHLAAGERKYSLTDVGKALVTDEQGLSYGAYVLQHHQDALMRAWTLVHEAVVDPTKEPFERANGEGAYAYYLKQAEMNELMVKAMSGVSVPFMRAMLEGYDGFQGVERLVDVGGSGGDCLRMILLKYPNIKEGINFDLPEVVAKAPPTPCVTHVGGDMFKSIPQGDAIFMKWVLTTWTDEEIKQIMQNCHKALPEGGKLIACEPVLPEHSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFRQLANDAGFPRFRAFNVDHFYTVLEFQK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0727 354 SUPERFAMILY "Winged helix" DNA-binding domain 8 106 IPR036390 -
Pvu5g0727 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Pvu5g0727 354 Gene3D Vaccinia Virus protein VP39 108 354 IPR029063 -
Pvu5g0727 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 352 IPR029063 -
Pvu5g0727 354 Gene3D - 1 107 IPR036388 -
Pvu5g0727 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 354 IPR016461 GO:0008168
Pvu5g0727 354 Pfam O-methyltransferase domain 128 335 IPR001077 GO:0008171
Pvu5g0727 354 PANTHER OS02G0823400 PROTEIN 4 353 - -
Pvu5g0727 354 PANTHER O-METHYLTRANSFERASE 4 353 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0727 Pvu-Chr5 11532987 11536578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0727 1 354 Monolignol Biosynthesis Gene Families AT3G53140 75.278 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0727 - - gmx:102663764 637.876