Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0720 ATGCGATCATCGCCGTCTTCTTTGGGTTCGTCGTCTCGATCGGGTTTGCGGCTTCGTAAGAAGCACAAGAGGTTGGATGCAATATGTGAGGAGGAGTACACTCGAAACCATGGTGAGTTGAATGATGATAATGATGGGTTGAATCCTGATGCAGGGGTTCGTCGGAGCTCCCGGGTTCGCCGTGCCCCGGTGCTTCTCGACGCGTCTCCCGCTCCGCCAAAGAAACGACGGAGGGTGGGGAAGGGTGGAATTGATCATGGTGTGGAGAGTCCTTCGACTTTGGGGCGGGAAAATAGAGGTTCAGGTGGGGCTTGGAGTTCTAGGTTGAGATCAAGGGTTGAGAATGTAAGTTTTAGGGTAAAAGAGGATGGGGAATCGCGACGTGGGAAGAGGAAGCTTTTTGAGGGTGTGGTGGGAAAAAGGGATGATGATGACGTTGGTAGGAAGGAGGAGTTGGAAGGTTTGATGCCGAAAGTGGTTAAGTCGAAGAGACCGGGGAGGATTAAAGCCACAAAGCACGATGAAGGGCATGAAGATGATGTGTCTCATGGGAGTTTGGAGGAGAGTAAGAGTCAGGAAGTGGTGCTTGTGTCTAGCAGTGACGAGGAGAGTGATTCAGAATCGGAAACTGAATTGTCGGGAGAGAATCAGATGGATGAATCGGATGGTAATGCCCCTTCCATGGGAGGAAATGAGGATGCGGATCAGATGGCTGATTCGGATGGGAGTGTCCCTCCCATGGTAGAGAATGAAGAGAGGAACTTATCCAGCGATTTGCGAATGAAGGAGTGTGGCGATGACATTGAATCGTCGTCACAGGTGGAACATGAAGATAAAGTGGATTATCAGTTAGAGGGTGCGAAGGAAAGCAAAAGTGTAGGTAATGCAGCTGAGCAGGTTGATAATGAAGAATTCGCTGCTAAGAAGGTTGAGGATGGTGAAAATTTCTTGAAAGATGCTATTGTTGATAAGGAGGTTGATGTCAATGAAAATGTCTTGAAAGATGCAAATGCTGGGAGGAAGGATGAGTTGAAACATGCTTCAAATGACAAGCGTGGTCACCTGCGTATCAAAGAGGGCAGGCGGTGTGGTTTGTGTGGTGGAGGGACCGATGGTAAGCCTCCAAAAAGGTTAGCTCATGATAATGGTGAAAGTGAGAATGAAGCTTATAGTGGATCGTCATCTTCAGAGGAGACTAATTATGATATTTGGGATGGTTTTGATCATGAACCTGGTTGGCTTGGGCGTCTCTTGGGTCCTACTAAGGATCACCATGGTATTGCTAGAATATGGGTTCATCTGCACTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCCAACTTTGGATGCTTAAAAAATGTGAGGGCTGCACTTTTCCGCGGAAGGGCATTGAAGTGCACACGCTGTGGGAGGCGAGGGGCAACCACTGGTTGTCGTGTTGATCGTTGTCCAAGAACTTATCACTTGCCTTGTGCCAGAGCCAGTGGTTGCATCTTTGATCATCGTAAATTTCTCATAGCCTGTACAGATCATCGGCATCTCTTCCAACCTCGTGGTAATAAATATTTAGCCCGGATAAAGAAGTTGAAGGCTAGGAAAATGATGTGGGAGATAAGGAAGCGGTCGAACGAAGCTTGTAGAAAAGATATTGGAGATGAAGAGAGATGGTTGGAAAACTGTGGAGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCAGTGTACATTGGGGGTTCAGACTCTGCTAGTGAAAATTTGTTTCAGGGTTGGGAATCTGTTGCTGGGCTCAAAGATGTCATCCGTTGTATGAAAGAAGTTGTCATTTTACCTCTGTTGTACCCTGAGCTATTTGATAATTTAGGGCTTACACCACCAAGAGGTGTTCTTTTACACGGGCATCCTGGAACAGGGAAAACCTTAGTTGTCCGGGCATTGATAGGTGCATGTGCCCGTGGTGATAAACGGATTGCATATTTTGCCCGGAAAGGTGCAGATTGCTTGGGAAAATATGTTGGTGATGCTGAGCGTCAACTAAGACTATTGTTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAAATAGATGGTTTGGCACCCCTCCGCACTAGGCAGCAAGACCAGACACATAGTTCTGTTGTGTCAACATTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGTTCAGTTGTGGTCATAGGTGCCACAAACCGTCCTGAAGCTGTTGACCCAGCACTTAGGCGCCCTGGTAGGTTTGATCGGGAAATTTATTTTCCATTACCATCAATTGAGGACAGAGCTTCCATTCTCTCACTTCACACCCAAAAGTGGCCAAAACCAATTACCGGATCCTTGCTTGAATGGATTGCAAGAAAAACACCAGGCTTCGCAGGTGCTGATCTCCAGGCTCTTTGTACGCAAGCAGCTATTAATGCTTTGAAGAGGAATTTCCCTTTGCAAGAAGTCTTGTCTTTAGTTGCCCAAGAAAAGCATTCTGGTTCTAAGCAAATTCCTCTTCCATCCTTTGCAGTGGAGGAGAGGGACTGGTTAGAGGCTGTTTTTTCTTCCCCACTACCTTGCTCCCGAAGAGATGCTGGAAATGCTGCCAATGATGTAGTATGCTCCCCTCTTCCCATCCAACTTATTCCTTGTTTATTGCAGCCATTATGCACTCTTCTTGTATCTCTATATCTTGATGAACGTCTATGGTTACCACTTCCCATATCGAAATCTGTAACTGTGATAAAGGATGCTATGATTTCTGCTCTGGACAAAAAGCAAAAGCCTTTTGATCACTGGTGGTTGCACATGGATGAATTTCTTCATGAACACAACACTTTTCATGAGTTAAAGATAAAGCTTACTTGTTCTGGTATTTTATCTGCGGATGATGGCATTATTGGTTCTAATGATACTGTGGATGATGCTTATGATAATAACTTGAGGCTAGAATCCTACACAAGGAACCATCTTGGCATGCGTAGTGGTTTATTTGCATTGACCAACAAATCTGGATTTCGGATACTAATTTCTGGAAATCCACGAACTGGCCAGAGACATCTTGCTTCTTGTCTTCTTCACTGCTTTATTGGAAATATTGAAATTCAGAAGATTGATATGGCAACTATTTTGCAAGAAGGGCATGGAGAAGTGGTGCAGGGCATTGCACAAATATTAATGAAATGTGCTAGCAGACAATCTTGCGTAGTATTCTTGCCAAGAATTGATTTATGGGCTCTGGAGAAACATTTTCAAATTGCTGACAGGACTGATTCGTGTTTAAAGATGGGCAAGTCTTGTTTCACACCAAACCAAGTTGTTGAGAAGGAAAGTGACATCAGTACTGAGAAAAAATCAACTGAGATGGCCAATGGCCAGGCTATCACAAAGGCTTCATTTGCTTGGATGTCATTTATTGAGCAGGTGGAATCCATTGGTGTATCCACATCCTTGATGATTCTGGCTACTTCAGAAGTTCCCTATAAAGAACTTCCTCGCAAAGTAAGCGAATTCTTCAAGAGCTATCAATCTAAAGACAGCCAGTCAACTCCTTTGGAGCAGACAGTTCCTCGTTTCTCTCTGCAGATTGATGGGAATTTTGACCGTGACATGGTGATCAATTTATCTGCACTAGGGCTATTGAGAAATGTAGTTGAGCAGCTTGTTCAATTGCTTCATCAGAGATCTCATGTTCATATGGGTGGACAAAAGGGCAACAGAACCTATGAATCAGTTGAAGTTTGTAAAGATAAGGTATGTCAAAGAAAAGATGGATCAGCCAATGATAAAAAGAGTGAAATCCAACATGAGTCCTTTGCAAAAGTTCCACCAACATCAAACAGCAAGTCACTGAAGGGAAAGTCAACCCTGTTGTTGGCAATATCTACACTTGGCTATCAAATTCTCTTATACCCTCATTTTGCTGAACTTTGTTGGGTCACTTCAAAACTCAAAGAAGGTCCTTGTGCTGATGTAAGTGGACCTTGGAGGGGTTGGCCTTTCAATTCTTGTATAATTCGTCCTAATAATTCACATGACAAGGTTGTAGTTTCTTGTAATTCTGGTAGCATTAAAAGCAGAGAATCATCTGGTCTTGTCAGAGGCTTGATTGCTGTTGGTTTATCAGCTTACAGAGGTGTTTATAGATCAGTTAGAGAAGTTTCCCTTGATGTAAGGAAGGTTCTTGAGGTCTTAATAAAGAAAATCAATACCAAAATTCAAGCTGGGAAAGATAGATATCAATATTTTCGTATTTTATCTCAAGTGGCTTATTTTGAAGACATGGTCAACAACTGGGCTTACTCATTGCTAAGTCTGGAGCAGGATTCTTATGAGCATACAACAAAGGTTTCACCAGCAAGTGGTGGGTCGTTAAACAGTCATCCCACAAGTGAAAATCACAAATCAGGAGGTGAGGACTGCCATTTTGCTGTTCCTGGAGATGGTCATGATTTGGAGACATTGGAGGAGAGTCATAACGGAATTGCTGCTGAAATGGCTGGATGTATCACCTCTAATAACCAAAATGGTACTTTAGATATGGATTGTGATGATGGAAATGCTAGCTCTGAAGGATCTCTACAAAATGATTCTTTTTCTGAAAAGCATATCAACAACTCTGCTGCTGCTGCTATGACTGCAAACCAACCACTTTATCCAACTACAAGTCGGGAGAATGGAACACTATTAGTACAACATGAATCTCTAACTGCTGGTAATAATGAAGAGGTGCGTGAAGAACTAGGGATTTCAAATAACTTCAGCAAATCCTTGGGCACTCAATGTGTGGTTCTTTCTGGAAATGGAGTTCACGCTGCTTTCGAACCAGAGACACAAAATGTTGAGATTGGTAACTGTCCCGTCTCTGATCAGCCTCTTACTGTGTCCTCATCCTCTCAAGACATTGGTGCAAAATCAAGTGATGTTAAATCTGATAAACATGAGAATGCTACAGATAATAGTGTCTCTTCAAGTAATGGTAGTGTTCCTGCTGAGTCGGGGGTTATTTGCTTGTATCAATGTTGCCCTGCATGTCTTCGTAGTCTCCATCATTTGACAAAGAAAATGCTTCTTGGAGACTGGGGGTTGAACAGTGACCAGTGGAGTGTAGAAGATGTTCATGATGCTGTTTCATCATTATCTGTGGATCTTATTTCAGCAGTTAGAAAAAGCTTTATGGCTGAAGATTTCATTGATTCATCAAAGAAAAGCTTAAGGAATGAAAATCATGGAACATCTCTTGATTGTGTGAACCTGAGAACGTGTAATGCTGAAAGCCAATGCAAGGATGTTGTGCCTGCTGAATGTGTTTCTCACTCTGCAAGCCAACATGCAACTGCAATTGAAGATACGGCACTAAATGAAGAATCAGCAATGGTTGATCTTAAATTTGTTTTCAGAGATGGTGTCCTAGTTCATATGGACCCTGACAAGGATGTCTCAGCTCACTGTAAATTTGAGAACTTGTGCCTTTGTTCTCTTAGAGAGTTGATACTAATGACAAAGCGCCCTTTTGATTAG 5559 0.4301 MRSSPSSLGSSSRSGLRLRKKHKRLDAICEEEYTRNHGELNDDNDGLNPDAGVRRSSRVRRAPVLLDASPAPPKKRRRVGKGGIDHGVESPSTLGRENRGSGGAWSSRLRSRVENVSFRVKEDGESRRGKRKLFEGVVGKRDDDDVGRKEELEGLMPKVVKSKRPGRIKATKHDEGHEDDVSHGSLEESKSQEVVLVSSSDEESDSESETELSGENQMDESDGNAPSMGGNEDADQMADSDGSVPPMVENEERNLSSDLRMKECGDDIESSSQVEHEDKVDYQLEGAKESKSVGNAAEQVDNEEFAAKKVEDGENFLKDAIVDKEVDVNENVLKDANAGRKDELKHASNDKRGHLRIKEGRRCGLCGGGTDGKPPKRLAHDNGESENEAYSGSSSSEETNYDIWDGFDHEPGWLGRLLGPTKDHHGIARIWVHLHCAVWSPEVYFANFGCLKNVRAALFRGRALKCTRCGRRGATTGCRVDRCPRTYHLPCARASGCIFDHRKFLIACTDHRHLFQPRGNKYLARIKKLKARKMMWEIRKRSNEACRKDIGDEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSASENLFQGWESVAGLKDVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPLRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTQKWPKPITGSLLEWIARKTPGFAGADLQALCTQAAINALKRNFPLQEVLSLVAQEKHSGSKQIPLPSFAVEERDWLEAVFSSPLPCSRRDAGNAANDVVCSPLPIQLIPCLLQPLCTLLVSLYLDERLWLPLPISKSVTVIKDAMISALDKKQKPFDHWWLHMDEFLHEHNTFHELKIKLTCSGILSADDGIIGSNDTVDDAYDNNLRLESYTRNHLGMRSGLFALTNKSGFRILISGNPRTGQRHLASCLLHCFIGNIEIQKIDMATILQEGHGEVVQGIAQILMKCASRQSCVVFLPRIDLWALEKHFQIADRTDSCLKMGKSCFTPNQVVEKESDISTEKKSTEMANGQAITKASFAWMSFIEQVESIGVSTSLMILATSEVPYKELPRKVSEFFKSYQSKDSQSTPLEQTVPRFSLQIDGNFDRDMVINLSALGLLRNVVEQLVQLLHQRSHVHMGGQKGNRTYESVEVCKDKVCQRKDGSANDKKSEIQHESFAKVPPTSNSKSLKGKSTLLLAISTLGYQILLYPHFAELCWVTSKLKEGPCADVSGPWRGWPFNSCIIRPNNSHDKVVVSCNSGSIKSRESSGLVRGLIAVGLSAYRGVYRSVREVSLDVRKVLEVLIKKINTKIQAGKDRYQYFRILSQVAYFEDMVNNWAYSLLSLEQDSYEHTTKVSPASGGSLNSHPTSENHKSGGEDCHFAVPGDGHDLETLEESHNGIAAEMAGCITSNNQNGTLDMDCDDGNASSEGSLQNDSFSEKHINNSAAAAMTANQPLYPTTSRENGTLLVQHESLTAGNNEEVREELGISNNFSKSLGTQCVVLSGNGVHAAFEPETQNVEIGNCPVSDQPLTVSSSSQDIGAKSSDVKSDKHENATDNSVSSSNGSVPAESGVICLYQCCPACLRSLHHLTKKMLLGDWGLNSDQWSVEDVHDAVSSLSVDLISAVRKSFMAEDFIDSSKKSLRNENHGTSLDCVNLRTCNAESQCKDVVPAECVSHSASQHATAIEDTALNEESAMVDLKFVFRDGVLVHMDPDKDVSAHCKFENLCLCSLRELILMTKRPFD* 1853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 1 259 - -
Pvu5g0720 1852 Pfam PHD-like zinc-binding domain 433 512 - -
Pvu5g0720 1852 Gene3D - 600 773 IPR027417 -
Pvu5g0720 1852 SMART AAA_5 634 775 IPR003593 -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 168 187 - -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 23 44 - -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 366 398 - -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 1272 1293 - -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 1479 1494 - -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 1638 1674 - -
Pvu5g0720 1852 Pfam AAA+ lid domain 799 831 IPR041569 -
Pvu5g0720 1852 ProSitePatterns AAA-protein family signature. 743 761 IPR003960 GO:0005524|GO:0016887
Pvu5g0720 1852 Gene3D - 774 837 - -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 1460 1494 - -
Pvu5g0720 1852 Pfam ATPase family associated with various cellular activities (AAA) 638 773 IPR003959 GO:0005524|GO:0016887
Pvu5g0720 1852 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 408 514 IPR013083 -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 1460 1478 - -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 114 160 - -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 94 113 - -
Pvu5g0720 1852 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 50 1848 - -
Pvu5g0720 1852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 600 831 IPR027417 -
Pvu5g0720 1852 MobiDBLite consensus disorder prediction 200 216 - -
Pvu5g0720 1852 CDD AAA 632 773 - -
Pvu5g0720 1852 ProSiteProfiles Extended PHD (ePHD) domain profile. 400 512 IPR034732 -
Pvu5g0720 1852 PANTHER AAA DOMAIN-CONTAINING 50 1848 IPR045199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0720 Pvu-Chr5 11218953 11226509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0720 600 835 Calmodulin-binding Proteins AT3G56690 40.756 3.56e-45 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0720 - - gmx:100803849 2918.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0720 5 11218953 11226509 Pvu5g0720 5 11218953 11226509 ECH