Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0713 ATGAAGAAACAGAAGCAAACTCAGTTGAACCCCAATTGGCTTCAACTCCAACAAAAGCTGAATGGCTCAAAGGCTTCAAGGGCCTTCAAAAGTTCAGATGAAGATACCCCAGAATCAATATTGGGCAAACGTAAAGAGAGACCAGATGAGGAATCCAATGATAGTCAGATTAATCCTCTTACTCCTGTAAATGCTGATTCAAGTCTGACAGATGCAGTGGGCATGGATTGTGAAATGGTGGGTGTTGGTCAGGGAAACAAAAGTGCTCTTGGAAGAGTAACTCTGGTCAATAAGTGGGGAAATGTTATTTATGACGAGTTTGTTCGGCCAATTGAACGGGTTGTTGACTTCCGCACTAAAATTAGTGGCATAAGGCCTCGAGATCTTAGAAAAGCAAAGGATTTTTGGGCTGCTCAGAAGAAAGTGTCAGAGTTGATCAACGGAAGGATCCTCGTTGGTCATGCCTTGTCCAATGACCTTAAGGCATTGTTATTAAGTCACCCCAAAAAGGAAATAAGAGATACCTCCGAGTATCAACCATTTCTAAGATCAAATAGCAGAAGAGCACTGCGACATCTTGCTGCTGAACATCTTGGTGTGACGATCCAAACAGGAGAGCACTGCCCAATAGAAGATGCTCGTGCTGCTATGCTGCTTTACCAAAGAAATAAGAAGGAATGGGAGAAGAGCATAAAAGATCAATTTCGGTTCAATCAGAAGCAAAGGAAATTGAAGCAGAAAAAGAAGCAGAAGATTGAAGATGCTTCAAATGCAAACCATGTTGAAATTGGATCATAG 798 0.4185 MKKQKQTQLNPNWLQLQQKLNGSKASRAFKSSDEDTPESILGKRKERPDEESNDSQINPLTPVNADSSLTDAVGMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTKISGIRPRDLRKAKDFWAAQKKVSELINGRILVGHALSNDLKALLLSHPKKEIRDTSEYQPFLRSNSRRALRHLAAEHLGVTIQTGEHCPIEDARAAMLLYQRNKKEWEKSIKDQFRFNQKQRKLKQKKKQKIEDASNANHVEIGS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0713 265 Coils Coil 238 258 - -
Pvu5g0713 265 Gene3D - 68 248 IPR036397 GO:0003676
Pvu5g0713 265 Coils Coil 210 230 - -
Pvu5g0713 265 SUPERFAMILY Ribonuclease H-like 73 228 IPR012337 -
Pvu5g0713 265 Pfam Exonuclease 73 220 IPR013520 -
Pvu5g0713 265 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 26 250 - -
Pvu5g0713 265 CDD REX4_like 73 221 IPR037431 GO:0006364|GO:0008408
Pvu5g0713 265 PANTHER INTERFERON STIMULATED EXONUCLEASE GENE 20-RELATED 26 250 IPR034920 -
Pvu5g0713 265 SMART exoiiiendus 71 229 IPR013520 -
Pvu5g0713 265 MobiDBLite consensus disorder prediction 20 65 - -
Pvu5g0713 265 MobiDBLite consensus disorder prediction 238 265 - -
Pvu5g0713 265 MobiDBLite consensus disorder prediction 28 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0713 Pvu-Chr5 11084474 11093091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0713 72 226 C2H2 Transcription Factor Family AT5G40310 36.842 5.69e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0713 K18327 - gmx:100819122 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0713 5 11084474 11093091 Pvu5g0713 5 11084474 11093091 ECH