Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0709 ATGGCACAGTTACCTCCCAAAATACCAACCATACCCCAAAATTGGCCATCTTTTCCTCACCAAAGGGTGCCAACAATGGCCAACTTCACCCCCACAACCTCATCCACCACCACCTCCACCGCCGCCGCCGCCACCACTCCCTCCCAACCCTCTTGGGTCGACGAGTTCCTCGACTTCTCCTCCACCCGGCGGGGGGCTCACCGGCGATCCGCCAGTGACTCCATTGCCTTCCTCGAGACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGACCGACTCGACGAGGACCAGCTGATTTCTATGTTCTCTGACGACATTGCCGCAGCGGCACTCCCGCCTCCGCCGCTTTCATCGGCGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGGCGTTGGACGTGAAGCCGAAGACCGAATCGGTTGAAGAGGAGAGCTCGTGCAGGAATGAGGCGGCGGCGCTGCAGCTCTCCGCCACTGCCACCTGCGCTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCAGCACAGAGATCAAGGGTAAGAAAGCTACAATACATCTCTGAGCTTGAAAGGAGCGTAACAACCTTACAGACGGAGGTATCAGCATTGTCACCACGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAGGCATTAAAGAAGGAAATAGAGAGATTGAGGCAAATCTACCACCAACAGAACCTGCAGAAGATGAGTAACACAGTGAACAACAATCTTCAAACGGCACCAACATCACAGCAGCCACAAGCTCCTATGCAATCACATTCCCTTCATCAACATCAGCATCAGCATCAGATGACAGTGTCTCAACCATTGGGATGCAAGGACAAGGAGCAGCTCCTGAGTTGA 999 0.5305 MAQLPPKIPTIPQNWPSFPHQRVPTMANFTPTTSSTTTSTAAAATTPSQPSWVDEFLDFSSTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDIAAAALPPPPLSSASNPSSPSSDQNSNNEEKPMAMALDVKPKTESVEEESSCRNEAAALQLSATATCAETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMSNTVNNNLQTAPTSQQPQAPMQSHSLHQHQHQHQMTVSQPLGCKDKEQLLS* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0709 332 MobiDBLite consensus disorder prediction 1 47 - -
Pvu5g0709 332 Coils Coil 259 279 - -
Pvu5g0709 332 PANTHER BASIC LEUCINE ZIPPER 2 1 299 - -
Pvu5g0709 332 MobiDBLite consensus disorder prediction 288 332 - -
Pvu5g0709 332 Pfam bZIP transcription factor 180 224 IPR004827 GO:0003700|GO:0006355
Pvu5g0709 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700|GO:0006355
Pvu5g0709 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 230 IPR004827 GO:0003700|GO:0006355
Pvu5g0709 332 Gene3D - 179 278 - -
Pvu5g0709 332 MobiDBLite consensus disorder prediction 288 322 - -
Pvu5g0709 332 MobiDBLite consensus disorder prediction 14 47 - -
Pvu5g0709 332 CDD bZIP_plant_RF2 181 231 IPR044759 GO:0003700|GO:0006355
Pvu5g0709 332 SUPERFAMILY Leucine zipper domain 180 234 IPR046347 GO:0003700|GO:0006355
Pvu5g0709 332 PANTHER BASIC LEUCINE ZIPPER 34 1 299 - -
Pvu5g0709 332 MobiDBLite consensus disorder prediction 110 134 - -
Pvu5g0709 332 SMART brlzneu 176 240 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0709 Pvu-Chr5 10927806 10931339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0709 1 258 bZIP Transcription Factor Family AT3G58120 53.082 7.35e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu5g0709 bZIP_1 8.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0709 - - gmx:100820197 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0709 5 10927806 10931339 Pvu5g0709 5 10927806 10931339 ECH