Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0700 ATGGGGTCACCATTCAGGCCAATCTCATGCACCAGAAAAACTCCGTACAGAATAGAAACCAGGAACTTGTCATACAAGTTGTGCAGCCAACTTGATGAGTATAGAAGTCTTTGTTTTGGTTCTAGTCCAGGGAGAGGTGCCAAGTTCATTTTGAAGGATGTGAATTGTGAGGCAAGGCCAGGGGAGCTGACTGCTATTGCTGGTCCTAGTGGAGCTGGAAAAACCACACTGCTTGAGATTCTTGCAGGGAGAATATCTCCGTGTAATAAAGTGTCTGGTCATGTGCTTGTCAATCATAGGCCTATGGATGTGAACCGGTTTAGAAGAACATCAGGGTATGTGACACAAGATGATGCTTTGTTCCCTTCACTGACAGTTAGAGAGACACTCATGTATAGTGCCATGCTGAGGCTTCCTGGGGGAAGAAAAGTAGCTGCCGTCAGAGTTGAAGAGTTGATGAAGGAGCTTGGGTTGGACCATATTGCAGATTCAAGAATTGGAGGTGCATCAGACCATGGTATATCCGGAGGGGAAAGGCGTAGAGTTTCCATTGGTGTGGACTTGGTTCATGACCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCAGCTCTTAATGTAGTCTCATTGCTTAGACTTGTGGCGTTTAATCAAGGTAAGACAATTATCTTAACTATCCACCAACCTGGTTTCCGAATCTTAGAGCTGTTTGATGGCCTCATTTTGCTGTCCGATGGATTTGTGATGCATAATGGATCATTGAATCTTCTTGAGGCTAGGCTCAAGTTAGCTGGGCACCACATTCCCGACCATGTCAATGTCCTTGAGTTTGCTCTTGATGTCAAACAAAACGACTATAACCACAATGATAATCTGGGGACAACCATATTTGTCACCAGAATCCTACAGGCCATAGTAGCTGGTTTTATTCTAGGGAGCATATTTTTCAATGTTGGCAATCAACAGAGTCATGCAGCATTGCAAACAAGAAGTGGCTTCTTTGCTTTCAGCCTTACCTTTTTGTTATCATCAACAACAGAAGGCTTGCCTATTTTCTTGGCTGAGAGAAGAGGTTTTATGAGAGAGACCTCTGGAGGAGCTTATAGAGTTTCTTCCTATGTTTTAGCTAATGCCCTTGTGTTCCTTCCCTTCCTTCTATTGGTTGGTCTTCTGTACTCTACTCCAGTTTATTGGCTTGTAGGATTAAGGAAAGACATCGATGGTTTCCTTTACTTCTCCGTAGTGGTTTGGTTGGTTCTACTCATGTCGAATTCTCTTGTGGCTTGTTTCAGCGCTCTGGTCCCAAATTTCATCCTGGGGAGCTCAGTAATTGCAGGTCTAATGGGGTCTTTCTTTCTATTTTCAGGGTATTTCATATCTGAGGAAAAAATACCAAGTTACTGGATTTATATGCACTATTTGAGCCTATTCAAGTATCCATTTGAGTGTCTAATGATAAATGAGTATGGGGGAGAGCGAGGGAAAACGAGGTGCTTAGAAATTAGCAACGGAAAATGCATACTACATGGAGTTGAATTCTTAAGACAACAGGGTCTGAAAGATTCACAAAAATGGAGCAATTTGCCTGTAATGTTGAGTTTCATAGTGGGATATAGAGTGCTTAACTTTTTCATTCTTTGGTTCAGATGCTACAGGACAAGAAAATAG 1683 0.4242 MGSPFRPISCTRKTPYRIETRNLSYKLCSQLDEYRSLCFGSSPGRGAKFILKDVNCEARPGELTAIAGPSGAGKTTLLEILAGRISPCNKVSGHVLVNHRPMDVNRFRRTSGYVTQDDALFPSLTVRETLMYSAMLRLPGGRKVAAVRVEELMKELGLDHIADSRIGGASDHGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNVVSLLRLVAFNQGKTIILTIHQPGFRILELFDGLILLSDGFVMHNGSLNLLEARLKLAGHHIPDHVNVLEFALDVKQNDYNHNDNLGTTIFVTRILQAIVAGFILGSIFFNVGNQQSHAALQTRSGFFAFSLTFLLSSTTEGLPIFLAERRGFMRETSGGAYRVSSYVLANALVFLPFLLLVGLLYSTPVYWLVGLRKDIDGFLYFSVVVWLVLLMSNSLVACFSALVPNFILGSSVIAGLMGSFFLFSGYFISEEKIPSYWIYMHYLSLFKYPFECLMINEYGGERGKTRCLEISNGKCILHGVEFLRQQGLKDSQKWSNLPVMLSFIVGYRVLNFFILWFRCYRTRK* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0700 560 Gene3D - 15 284 IPR027417 -
Pvu5g0700 560 SMART AAA_5 60 252 IPR003593 -
Pvu5g0700 560 Pfam ABC-2 type transporter 301 494 IPR013525 GO:0016020|GO:0140359
Pvu5g0700 560 CDD ABCG_EPDR 41 257 - -
Pvu5g0700 560 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524
Pvu5g0700 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 267 IPR027417 -
Pvu5g0700 560 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 300 552 - -
Pvu5g0700 560 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 4 294 - -
Pvu5g0700 560 Pfam ABC transporter 51 202 IPR003439 GO:0005524
Pvu5g0700 560 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 275 IPR003439 GO:0005524
Pvu5g0700 560 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 300 552 - -
Pvu5g0700 560 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 4 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0700 Pvu-Chr5 10525467 10527295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0700 41 300 Calmodulin-binding Proteins AT2G36910 25.660 3.60e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0700 K05681 - gmx:100776372 965.296