Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0688 ATGGCTACCTTCTCCAAGGAACGCGACAACTTTGTATATGCTGCCAAGTTAGCTGAACAAGCTGAACGATATGATGAAATGGTGGATGCGATGAAGAAGGTGGCGAAGTTGGACGTTGAGCTGAGTGTGGAAGAGAGGAACTTGTTCTCTGTTGGATACAAAAATGTGGTGGGGTCACGGAGAGCTTCATGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTTAGGCGCATCAGGGATTATAGGCACAAGGTGGAGTTGGAGCTGTCTAACATTTGCAGTGACATTATGATAATTTTAGATGAGCATCTTATTCCATCCACTAATATTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGACTATTACCGGTATTTGGCAGAATTCAAAGCTGGTAATGAAAAGAAAGAGGTAGCAGATCAGTCACTTAAAGCATATCAGACAGCTGCTACCACTGCTGAGAGTGAATTACAACCTACACATCCTATTCGTTTGGGTCTGGCTCTAAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCATCTTGCTAAGCAAGCCTTTGATGATGCTGTCTCAGAGCTAGATACCCTGAATGAGGAATCTTACAAGGATGGCACCTTGATCTTGCAGCTGTTGAGGGATAACCTTACCTTATGGACTTCTGATATCCCCGAAGAGGGTG 730 0.4315 MATFSKERDNFVYAAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVRRIRDYRHKVELELSNICSDIMIILDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYQTAATTAESELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDTLNEESYKDGTLILQLLRDNLTLWTSDIPEEG 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0688 243 SMART 1433_4 8 243 IPR023410 -
Pvu5g0688 243 PIRSF 14-3-3 2 243 IPR000308 -
Pvu5g0688 243 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Pvu5g0688 243 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Pvu5g0688 243 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Pvu5g0688 243 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Pvu5g0688 243 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Pvu5g0688 243 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Pvu5g0688 243 PANTHER 14-3-3 PROTEIN 3 242 IPR000308 -
Pvu5g0688 243 Gene3D - 2 243 IPR036815 -
Pvu5g0688 243 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Pvu5g0688 243 PANTHER GENERAL REGULATORY FACTOR 2 3 242 - -
Pvu5g0688 243 Coils Coil 14 34 - -
Pvu5g0688 243 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Pvu5g0688 243 Pfam 14-3-3 protein 15 236 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0688 Pvu-Chr5 10288469 10291807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0688 5 243 14-3-3 family AT2G42590 79.916 1.34e-145 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0688 K06630 - gmx:547574 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0688 5 10288469 10291807 Pvu5g0688 5 10288469 10291807 ECH