Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0673 ATGATTGTAACACTGTTCTTCTGTCTTTTTCTGGCCACCATATTTTCAACAATAGTTGTTCTTCTCCTATTGAGATTATGCGAAATTATATCAGATATTCTTCTTGAAACACTTGAGGATGACACTGAAGATGGAAGAACACCTTTGGTAGTTCAGTCTTTTCTGACTAACCAAGATTCTTTGAATCAAATAAGTCATAGTAGGGAAAGATTACAATCACATTCACAAACTTTTGGGATGAGATCAATTCATAAAGCTTCATCAATGAAACTGCCACAGCTAGTGATTTATGGACAAAATCCAAATGAGTTGAGTCCATTTTGCAGTAGTTGTGTCATATGTTTGGAGAGCTTCATCACCGGGGAGTCTTGTCAAATTCTTCCACCTTGCAATCACTTATTTCATTCTTACTGCATAAGGCATTGGTTGAAAGACAATGCCTCTTGCCCCATTTGTCGAAGTGTTTATTAG 471 0.3652 MIVTLFFCLFLATIFSTIVVLLLLRLCEIISDILLETLEDDTEDGRTPLVVQSFLTNQDSLNQISHSRERLQSHSQTFGMRSIHKASSMKLPQLVIYGQNPNELSPFCSSCVICLESFITGESCQILPPCNHLFHSYCIRHWLKDNASCPICRSVY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0673 156 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Pvu5g0673 156 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 2 154 - -
Pvu5g0673 156 SMART ring_2 111 152 IPR001841 -
Pvu5g0673 156 PANTHER RING-H2 FINGER PROTEIN ATL3-LIKE 2 154 - -
Pvu5g0673 156 Pfam Ring finger domain 110 153 IPR001841 -
Pvu5g0673 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 156 IPR013083 -
Pvu5g0673 156 SUPERFAMILY RING/U-box 110 156 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0673 13 153 C3H Transcription Factor Family AT3G10910 30.282 6.55e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0673 - - pvu:PHAVU_005G065200g 321.627