Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0668 ATGAGGAATGCCTTGATTATAGCCTTTTCCATAACCATATGCTTCATCGCTTTTGTGATATCCAAGATTGTTATTTCAGTCCTCCTCTACAAAAGATGGAGAAGAAAACAGATGGTTCATGAAGAAGGCTATCCAGGAGGGAAGATAGTACTATTTAGGTCCTCCGAGCTTAAATCTCTCACAGCTGATGCGATCTTAAAGAAGACACAGAAACTGAACAACAAGGACATCATTGGGTCAGGTGGTTATGGTGTGGTTTATGGACTAAAACTAGATGAATCCACAGCCTTGGCAGTAAAAAAACTAAACCGTGGAACTGCCGAGAGAGATAAAGGTTTTGAGAGAGAGTTGGAAGCAATGGCAGACATAAAACACCGCAACATTTTGACCCTTCATGGATATTACACTGCACAACATTACAATCTTCTCATATATGAGCTAATGCCCAATGGAAGTTTGGACTCCTTTTTGCATGGGAGATCAAGGGACAAGAAGTTTTTGGATTGGCCAACCAGATATAGAATAGCTGCAGGTGCAGCTAGAGGAATATCATATCTTCATCATGATTGCATCCCTCGCATTATCCACAGAGACATCAAGTCAAGTAACATATTGTTGGATGAAAATATGGATGCCCGAGTTTCTGATTTTGGATTAGCCACTTTGATGCAACCAAATAAAACTCATGTCTCAACATTAGTGGCTGGAACTTTTGGATACTTGGCACCTGAATATTTTGATACAGGAAGAGCGACACTCAAAGGGGATGTTTACAGCTTTGGAGTTGTTTTACTGGAGCTTTTAACTGGGAAAAAACCCAGTGATGAAGCATTTATGGAAGAGGGAACCATGCTTGTCACATGGGTGAAGGCTGTTGTTAGAGAGAACAAGGAGGATTTAGTCCTTGATAGTAGCTTAGGATCTTGTTCAATGCAAGAGGTAAATAAGGTGTTCAACATTGCAATGATGTGTCTTGAACCAGATCCTTTGAAGAGGCCAACCATGGGTGATGTTGTCAAAATGCTTGACCAAACACAACAAGATAAACTTGTTAAAGAATCCTGA 1065 0.4038 MRNALIIAFSITICFIAFVISKIVISVLLYKRWRRKQMVHEEGYPGGKIVLFRSSELKSLTADAILKKTQKLNNKDIIGSGGYGVVYGLKLDESTALAVKKLNRGTAERDKGFERELEAMADIKHRNILTLHGYYTAQHYNLLIYELMPNGSLDSFLHGRSRDKKFLDWPTRYRIAAGAARGISYLHHDCIPRIIHRDIKSSNILLDENMDARVSDFGLATLMQPNKTHVSTLVAGTFGYLAPEYFDTGRATLKGDVYSFGVVLLELLTGKKPSDEAFMEEGTMLVTWVKAVVRENKEDLVLDSSLGSCSMQEVNKVFNIAMMCLEPDPLKRPTMGDVVKMLDQTQQDKLVKES* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0668 354 SUPERFAMILY Protein kinase-like (PK-like) 53 342 IPR011009 -
Pvu5g0668 354 SMART serkin_6 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0668 354 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Pvu5g0668 354 Pfam Protein kinase domain 74 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0668 354 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 347 - -
Pvu5g0668 354 Gene3D Transferase(Phosphotransferase) domain 1 148 353 - -
Pvu5g0668 354 PANTHER BNAA07G39120D PROTEIN 1 347 - -
Pvu5g0668 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pvu5g0668 354 ProSiteProfiles Protein kinase domain profile. 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0668 354 Gene3D Phosphorylase Kinase; domain 1 48 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0668 Pvu-Chr5 9765228 9768174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0668 5 344 Receptor kinase-like Gene Family AT2G35620 45.190 3.12e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pvu5g0668 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0668 - - ahf:112703495 548.51