Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0650 ATGAGGTTTTTGGGTTACATAGCTCAATGGAGAAGCGCAGCGAAGGAAGCGTTGGATCGCACAGCCATCACTGTGAATTTCCTGTGCTGGCTTCACTTCACCAGCAACTACCTCTGTTCCCCGTGTCACGCGTATGGGGTTAGCATGCTCCCCACCCTCAACGTAACCGGCGACGTCCTCCTCGCCGACCACCTCTCCCCGCTGCTCGGGAACGTCGGGCACGGCGACTTGGTTCTCGTTCGGTCCCCTCTCAACCCTAAGATCAGGTTGACGAAGCGCGTCGTGGCCGTGGAAGGGGACACCGTCACTTACTTCGACCCTATGCACTCTGAGGCTTCTCAAGTTGCAGTGGTGCCTAAGGGGCATGTTTGGATTCAGGGGGATAACATTTATGCTTCCCGTGACTCACGCCATTTCGGTCCTGTTCCATATGGTCTCATAGAAGGGAAAGTGTTTTTCCGGGTATGGCCACCTAGCAGCTTTGGACTACTAGATCAATGA 501 0.5489 MRFLGYIAQWRSAAKEALDRTAITVNFLCWLHFTSNYLCSPCHAYGVSMLPTLNVTGDVLLADHLSPLLGNVGHGDLVLVRSPLNPKIRLTKRVVAVEGDTVTYFDPMHSEASQVAVVPKGHVWIQGDNIYASRDSRHFGPVPYGLIEGKVFFRVWPPSSFGLLDQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0650 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pvu5g0650 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pvu5g0650 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pvu5g0650 166 Gene3D Umud Fragment, subunit A 35 162 - -
Pvu5g0650 166 SUPERFAMILY LexA/Signal peptidase 37 164 IPR036286 -
Pvu5g0650 166 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 8 164 - -
Pvu5g0650 166 Pfam Signal peptidase, peptidase S26 24 105 IPR019533 GO:0004252|GO:0006465
Pvu5g0650 166 Pfam Signal peptidase, peptidase S26 113 156 IPR019533 GO:0004252|GO:0006465
Pvu5g0650 166 CDD S26_SPase_I 46 151 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0650 Pvu-Chr5 9063857 9067749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0650 49 164 MADS-box Gene Family AT1G29960 51.282 6.94e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0650 K09647 - csin:114274489 238.81