Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0622 ATGAAGCACTTGATCCGTCGCCTCTCGCGCGTCGCCGACTCCTCTAATTACACGCTCCTCCGCTCCGACTCCTCCGACGACGACGCCTCCTCGTCCAGGGGCTGCCGCCGGCGCCTCCGGGCGGAGTCGTTCCGCGCTTCCAAGATCCGACGCTCCTCCGCGGTGGTTCCGGAGGGGCACGTGCCGATCTACGTCGGCGACGAGATGGAGAGGTTCGTGGTGTGCGCTGAGCTCCTGAACCACCCTGTCTTCGTGAAACTGCTCAACGAATCCGCGCAGGAATACGGCTACGAACAGAAAGGCGTGCTCCGGTTACCGTGCCGCGTTTTCGACTTTGAGCGCGTACTCCACGCGCTCCGTCTTGGCCTCGACGCGCCTGACGTCTCCGAGCTCGTTAGCTTCTCGCCGGAAGAATTCTCCTGA 423 0.6359 MKHLIRRLSRVADSSNYTLLRSDSSDDDASSSRGCRRRLRAESFRASKIRRSSAVVPEGHVPIYVGDEMERFVVCAELLNHPVFVKLLNESAQEYGYEQKGVLRLPCRVFDFERVLHALRLGLDAPDVSELVSFSPEEFS* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0622 140 Pfam Auxin responsive protein 14 119 IPR003676 GO:0009733
Pvu5g0622 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 134 IPR003676 GO:0009733
Pvu5g0622 140 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0622 Pvu-Chr5 8332463 8333547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0622 1 119 Calmodulin-binding Proteins AT2G24400 28.571 2.81e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0622 K14488 - gmx:100793103 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0622 5 8332463 8333547 Pvu5g0622 5 8332463 8333547 ECH
Pvu5g0622 5 8332463 8333547 Pvu11g1792 11 44465565 44466394 PCT