Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0582 ATGAAATCTGGCAGAGACAAAGAGAAACAGAACGATCGCTGCATCAGTTCGCATATGCAGACCCTCCATCGCCGTCTTCTCCATACCCTAAACCTTGGCAACAGACATTTTGATGAGAAGACAAAGAGGTGGAGGTGGCAGTGCGCCAACATTGAAGTGCAGAAAAATGTATTACGATCAATTGGTGCCTTTCTTGATTCCTTATTGGGAGATGCACGTGCAGCACGTCATGCTGTTGTTAAGGAATCTGTTCCTGATATTTTGGGAGCATTATTATGGATTCTTCAATGCAAAAGTGAGGCCTTACTAAGCATGGCATCAACTGTTGCAGTTAAGTTAGTTAGTGTTCTGCCCAATCCATTATTGCAATCACATATGTTGGATCTTGTTTATTGTCTATCATCCTTGCTATCTTCACATCAAGTAGAAGTTGCTATACCCTGTGCTACCGCTTTGAATTTTGTAATCTCAAATTTGAGTGCTACAAGTGAGAAGGAAGTTATGGAAGCACTGAAAGAAATGGAGACTTCCTTTCAAATTTTTGGAAATATAAAAGATTTTGCTGAAGGTGCAAAGAAAATTGAGTATTTTGAAGAGATGACTTTACTTTTGAGCACTATACTGTGGCGCTGGCCTCCGTCTAGGTTCCCTGTTTGTAATGATGTAATACTTATGAAAGGTTTAGCAAACATCCATACAAAGACAGATAGTTCTACTAAACTAGCACTTCTAAAGTTGTACACGTCTATAGCTTTATGTGATTCTGCAGCAAGAAAACTTATAGAGGATGAAGAAGTATTTCCACAAATGTTTGTGCAGGCAATGGGAAAATCAAACCCTCATGCTATTCGGATAGAGGGGTTTAGGCTTGCTCAATGCCTATTGAGATCCCAAGATAATTGTTTAAAAGTGGTTGATTTGTGTGGTGAAGCTCTTGTTGAGGCCATAATTTGTGGAATGACAGAAACTAGGCTGAGTTCTAAAAAAATTGGAAACAACCATGGGTCTTTGTCAGTGGAAGCATGCCAGTTGGCTCTAATAACTCGCTGGGCTGGTGATCATCATACCAATTTTTGGAAACAAGGAATTGATAGAGTCCTTCTTAATCTTCTGATTGAAAATATTCAAGACCAATTGTTTGAACCTGTCTTGTCATTGGAAAAACAAATATATATTGCAAAAGAGGGATTGAAAGGCAATTATCATCTTGGTATTAGGAGTTATCTGTGGGACATTCTTGGGTGGCTTACAATTCACTGTGGAGAAAATTTAAACCCTTGTACTCATGGTAGTGAGCTCTGCATCAACTTACTAATTACATGTGCATGCTTGAGTTTTGTGGATACACTTGAAAAATGGTGCAGAATTTGTCAAAAGGATATTGATGATCATTTTCAAAGTGAACCAGTATTAAGGGCTGTTCTAATGATGATTCATTCTCCATGCAATTCCATCTCCTCACACACTAGATTCTTATTATCTGATGTACTAAAGGTGAAAGGCATGCCATGTTTGAAAAGCTTACTACATACTCTAGATTATACATCATCCCTGGAAAGCTATGGATCATTTGATAAACTTCAACTGGTTGTTAATTTAATTGGGTTTACTTGTCTTTCAAGTTTACCAGAGTACCAAAGATGTATCATTGAGAGCAAAGGGATAAAGGTGATTGTTCTTCTTCTGAAACGGTGCTTAGATAATGACATTCATATTGAAAGGCAGAGCTTTATTCCTCATTTGCATACAACATGCCATGAAAGGTCTTGTTGCTGTTTTGACAAAGGAGATTGGGAAGGTTCCAATGTTCTCTTATTTTATAGTTTGTTGGGCTTAACTGAAATTCTTCATCAGTGTGACCTTTTACGAGAGAATCCTCAGCAATTTTCTAGAGAGGTGACAAACATTAGTCCACAGTTAGTTAGCAAACTTCAAGAGATCTGTAAAAGCAGCTCTTTCAGTCCTGGTGTGAGATGGTATGTTTCTTATCTTCTAACTTATTTTGGATATTACGGTTTCCCAACTGAATTAGCCAAAAGGATTGGGAAATCTCTCAATATGGAAGAATACTCAGATATGAAGCTTGTTCTAGCAAAGGGGGAATCTCTGAGTGTTCATGCTGTTATTCTTGCTGTTCGATGTCCATCACTACTGCCTCCTCAATTATTACCTTGTAGGAAGAGTTCTAAAGAGATAGCAGATAATTTTGTTAGAGAGACCATGAGAGAAGTTCGATTATCTTCTCATGTTGATTATGAAGCATTGGTATTGTTGTTGGAATATGTGTACTTGGGATGCTTACATGGCAGTGAAGAAACAGCAAAGAAGCTAAAAATTCTCGCTAAGCGCTGCAATCTACAACCTTTGTTCCAAATGCTTCACAGACATCGTCCAAAGTGGGGCTTACCTTTCCCCAGCTTCAATCTTACTTCATCTTTTGGTTTAGCTGGAAGTTGTTTTTCGGATGTCATATTGGCAGCTAAATCAAATGAGCTTGTCAGGTGGACTTGCAATATTTGTTCTAACACAGTGCCCCATATGCATGTTCACAAAGTTATATTGCAGTCTGGTTGTGATTATCTACAAGGTTTGTTCCGGTCAGGAATGCAAGAAAGTCATTCACAAGTAATAAAAGTTGATATTAGCTGGCAAGCATTGATTAAACTAGTGCAGTGGTTTTATTCTGATGAGCTACCTGATCCTCCCTCTGGATGCTTGTGGGATAATATGGATGATAAAGAAAAGCTATTTAATCTACAACCATATGTGGAGCTTTATTGGCTTTCTGAGTTCTGGATTTTGGAAAATATTCAGGAAGCTTGCTGGAATGTTATTATGTCTTGTCTTGATTCTTCCTGGCGGTTGTCCATTAAAATAATCAAAATGGCTTATAATTTATCTTTGTGGAAGTTAGTTGATATTTCGGCAAATCTCATGGCTCCTTCATATCGTCTATTACGAGATTCTGGTGAACTAGAAGAATTTGATGATGCGCTAGTTCACTTGATTTATTCTGCTTCTATTCAACTTAACTAA 3036 0.3788 MKSGRDKEKQNDRCISSHMQTLHRRLLHTLNLGNRHFDEKTKRWRWQCANIEVQKNVLRSIGAFLDSLLGDARAARHAVVKESVPDILGALLWILQCKSEALLSMASTVAVKLVSVLPNPLLQSHMLDLVYCLSSLLSSHQVEVAIPCATALNFVISNLSATSEKEVMEALKEMETSFQIFGNIKDFAEGAKKIEYFEEMTLLLSTILWRWPPSRFPVCNDVILMKGLANIHTKTDSSTKLALLKLYTSIALCDSAARKLIEDEEVFPQMFVQAMGKSNPHAIRIEGFRLAQCLLRSQDNCLKVVDLCGEALVEAIICGMTETRLSSKKIGNNHGSLSVEACQLALITRWAGDHHTNFWKQGIDRVLLNLLIENIQDQLFEPVLSLEKQIYIAKEGLKGNYHLGIRSYLWDILGWLTIHCGENLNPCTHGSELCINLLITCACLSFVDTLEKWCRICQKDIDDHFQSEPVLRAVLMMIHSPCNSISSHTRFLLSDVLKVKGMPCLKSLLHTLDYTSSLESYGSFDKLQLVVNLIGFTCLSSLPEYQRCIIESKGIKVIVLLLKRCLDNDIHIERQSFIPHLHTTCHERSCCCFDKGDWEGSNVLLFYSLLGLTEILHQCDLLRENPQQFSREVTNISPQLVSKLQEICKSSSFSPGVRWYVSYLLTYFGYYGFPTELAKRIGKSLNMEEYSDMKLVLAKGESLSVHAVILAVRCPSLLPPQLLPCRKSSKEIADNFVRETMREVRLSSHVDYEALVLLLEYVYLGCLHGSEETAKKLKILAKRCNLQPLFQMLHRHRPKWGLPFPSFNLTSSFGLAGSCFSDVILAAKSNELVRWTCNICSNTVPHMHVHKVILQSGCDYLQGLFRSGMQESHSQVIKVDISWQALIKLVQWFYSDELPDPPSGCLWDNMDDKEKLFNLQPYVELYWLSEFWILENIQEACWNVIMSCLDSSWRLSIKIIKMAYNLSLWKLVDISANLMAPSYRLLRDSGELEEFDDALVHLIYSASIQLN* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0582 1011 CDD BTB_POZ_ZBTB_KLHL-like 820 903 - -
Pvu5g0582 1011 Pfam BTB/POZ domain 846 906 IPR000210 GO:0005515
Pvu5g0582 1011 SUPERFAMILY ARM repeat 50 424 IPR016024 -
Pvu5g0582 1011 PANTHER OS06G0674800 PROTEIN 1 1010 IPR044953 -
Pvu5g0582 1011 Gene3D - 25 378 IPR011989 -
Pvu5g0582 1011 SUPERFAMILY POZ domain 670 793 IPR011333 -
Pvu5g0582 1011 ProSiteProfiles BTB domain profile. 821 902 IPR000210 GO:0005515
Pvu5g0582 1011 Gene3D Potassium Channel Kv1.1; Chain A 815 985 IPR011333 -
Pvu5g0582 1011 ProSiteProfiles BTB domain profile. 691 771 IPR000210 GO:0005515
Pvu5g0582 1011 SMART BTB_4 821 949 IPR000210 GO:0005515
Pvu5g0582 1011 SMART BTB_4 691 801 IPR000210 GO:0005515
Pvu5g0582 1011 SUPERFAMILY POZ domain 818 946 IPR011333 -
Pvu5g0582 1011 Gene3D Potassium Channel Kv1.1; Chain A 673 796 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pvu5g0582 BTB 1.4e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0582 - - gsj:114385670 1737.24