Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0573 ATGGCTTCCGAGAACCTAGACCCCACCACAGTCTCGAAAGCCGTAGATGGGCTTCTCAAATGGCGTCGTTCCCAATCGGAGACTCAGAAGCCCAAACTCTTCGACCAAGATGATGAATTCGTGTACCTCATCGTAACGCTGAAGAAGGTTCCCTCGAAATCGCGCGTTAACCCATACAAGATTCCTCTCCCTCACTCCCTCCTTTCGGAGTTCTCCGAACAGTGTCTCATCCTCGACGACCGGCCCAACAAGGCCCGCGTGACCAAGGCGCAGGCCCAGGCCAGGATCCAATCCGAGTCCATCCCCATCGCGAAAGTCCTCAAACTGTCAAAGCTGGCCTCCGATTATCGCGCTTTTGAGGCGAAGCGGAAGCTCTGTGATTCCTACGATTTGTTTTTTTCGGAGAAGAGTATTGTGCCGTTGCTTCCTCGGCTACTCGGGAAGCAGTTTTTCAAGAAGAGGAAGTTGCCGGTGCCGGTGGATCTGAAGAAGAGTAACTGGAAGGAGCAGGTGGAGAAGGCGTGCTCGTCCGCGATGCTGTTCATGCGGACCGGCACGTGTAGCGTGGTTAGGGTTGCGAAGGTGGGGATGGAGAAGGACTCGATTGTGGAGAATGTGGTGGCTGCGGTTGAGGGGATTGTGGAGGTTGTGCCGAAGAAGTGGGGGAATGTGCGGTCGCTGCATTTGAAGATGATGGAGAGTGTCGCGTTGCCGGTGTATCAGGTGGTTCCGGATGTGAAGTTGAGGATTGAGGGTGCTAACGAGCAAGCTGAGATAAAGGAGAAGAACAAGAGGAAGAAAAAGGACGGGGAGGTTCGTGAATCGGCGAAGAAGAAGGGGAGGATTCATGAAGTTAGGTATATGGATGAGAGTGGTGGTGGGGATGAGATTGAAAATGAATTGGCGAGTGATGATAAGGTGAATGAGAAGAGGAAGAGAGGGGATTCGAGTGTGTTGAGTGGTGAGAAGAAGTTGAAGAAATCGTCTGGTGTAAAGGAGAAGAGGAAAAAGGGGAAGAGTGGAAGTGAATTGTTTGCTGAGGATAAGGAGTCTAGTGCCAAGGAGAAGAAGAAAAAGGTGAAGAATGGAAGTGAATTGGTTGTTAGGGATGAAGAATCAGGTGTGAAGAAGACGAAGAAAGGGGACTTGAAGAAGATTAAAACAGGGGAAGTGAAGGTGAAGGCTGTGAAAAGTGTTAAGGCTGTGAAAAGTGTGAAGGCTAAGAAAATTAAGAAGATTTAA 1242 0.5008 MASENLDPTTVSKAVDGLLKWRRSQSETQKPKLFDQDDEFVYLIVTLKKVPSKSRVNPYKIPLPHSLLSEFSEQCLILDDRPNKARVTKAQAQARIQSESIPIAKVLKLSKLASDYRAFEAKRKLCDSYDLFFSEKSIVPLLPRLLGKQFFKKRKLPVPVDLKKSNWKEQVEKACSSAMLFMRTGTCSVVRVAKVGMEKDSIVENVVAAVEGIVEVVPKKWGNVRSLHLKMMESVALPVYQVVPDVKLRIEGANEQAEIKEKNKRKKKDGEVRESAKKKGRIHEVRYMDESGGGDEIENELASDDKVNEKRKRGDSSVLSGEKKLKKSSGVKEKRKKGKSGSELFAEDKESSAKEKKKKVKNGSELVVRDEESGVKKTKKGDLKKIKTGEVKVKAVKSVKAVKSVKAKKIKKI* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0573 413 Pfam Ribosomal protein L1p/L10e family 32 235 IPR028364 -
Pvu5g0573 413 MobiDBLite consensus disorder prediction 259 328 - -
Pvu5g0573 413 CDD Ribosomal_L1 11 239 IPR028364 -
Pvu5g0573 413 MobiDBLite consensus disorder prediction 335 382 - -
Pvu5g0573 413 MobiDBLite consensus disorder prediction 259 382 - -
Pvu5g0573 413 SUPERFAMILY Ribosomal protein L1 32 240 IPR023674 -
Pvu5g0573 413 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 5 289 - -
Pvu5g0573 413 Gene3D - 85 177 IPR016095 -
Pvu5g0573 413 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 5 289 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0573 128 230 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 2.07e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0573 K14775 - gmx:100815650 487.648