Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0568 ATGACTTGTTTCCCTTTATTATTCAGTAAGTCATATTCTTCAGCGAGAAAAGATCCAGAGATTGATGAAGGCATTGATAATGTTAAGCTCTACTCCCACAAAGAATTAAGAAATGCCACTGAAGATTTCAGTCAAGCCAACAAAATCGGAGAGGGTGGTTTTGGTTCTGTCTACAAGGGACGACTTAAAGATGGAAAAGTTGCTGCAATAAAAGTTCTTGCAGCTGATTCAAGACAAGGAGTGAAGGAGTTCTTGACAGAGATTAATGTGATCTCAGAGATAGAGCATGAAAATTTGGTCAAGTTATATGGTTGTAGTGTGGATAAAAATAAAAGAATATTAGTCTACAATTACCTTGAGAATAACAGCCTGTCGCAAACTCTTCTAGGTGGAAGTCATAGTAGGATCTTCTTTGATTGGCGAACAAGATGTAAAATAAGTATTGGGATTGCTCGTGGACTGGCTTACCTTCATGAAGAAGTAAGGCCTCATATTGTTCACAGGGATATAAAAGCAAGCAACATCCTCCTTGACAAAGATCTTACACCCAAAATTTCAGATTTTGGTCTTGCAAAGCTTATTCCAGCAAATATGACTCATGTCAGCACTCGAGTAGCAGGAACAATAGGTTATTTGGCACCCGAGTATGCAATAGGAGGGAAGCTAACAAGGAAAGCAGATGTTTACAGCTTTGGTGTCCTCCTTGTGGAGATAGTCAGTGGAAGATCTAACACAAACTCGCGATTACCAATAGAAGAACAATTTCTTCTAGAGAGGACTTGGGAACTTTATGAGAGAAAGGAATTGGTTGGACTGGTAGATACATCACTGGACGAATTCGACGCCGAGCAGGCTTGTGAGTTTATGAAGATTGGTCTTCTTTGCACTCAGGAATCGCCAAAGCTCCGGCCATCCATGTCTTCTGTGGTCAAGATGCTCACTGGAAAAATGAATGTTGATGACAGTAAGATAACAAAACCTGCCTTAATTTCTGATTTTATGGACCTCAAAGTAAGAACGCACGAAGAAAGTAGTAGTGATGTGAAGAATTCATCTATGTACAATACAACCTCTTCTTCAGACAACCATGACACTACCATGTCATCTGCCACAACTACAAATTTCGCTGCAATATATGATGAAAGCTTGTGA 1152 0.3967 MTCFPLLFSKSYSSARKDPEIDEGIDNVKLYSHKELRNATEDFSQANKIGEGGFGSVYKGRLKDGKVAAIKVLAADSRQGVKEFLTEINVISEIEHENLVKLYGCSVDKNKRILVYNYLENNSLSQTLLGGSHSRIFFDWRTRCKISIGIARGLAYLHEEVRPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIGGKLTRKADVYSFGVLLVEIVSGRSNTNSRLPIEEQFLLERTWELYERKELVGLVDTSLDEFDAEQACEFMKIGLLCTQESPKLRPSMSSVVKMLTGKMNVDDSKITKPALISDFMDLKVRTHEESSSDVKNSSMYNTTSSSDNHDTTMSSATTTNFAAIYDESL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0568 383 Gene3D Transferase(Phosphotransferase) domain 1 119 330 - -
Pvu5g0568 383 MobiDBLite consensus disorder prediction 344 367 - -
Pvu5g0568 383 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 372 - -
Pvu5g0568 383 Pfam Protein kinase domain 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0568 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Pvu5g0568 383 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0568 383 Gene3D Phosphorylase Kinase; domain 1 13 118 - -
Pvu5g0568 383 CDD STKc_IRAK 49 315 - -
Pvu5g0568 383 PANTHER - 2 372 - -
Pvu5g0568 383 SMART serkin_6 43 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0568 383 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Pvu5g0568 383 SUPERFAMILY Protein kinase-like (PK-like) 22 314 IPR011009 -
Pvu5g0568 383 MobiDBLite consensus disorder prediction 347 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0568 Pvu-Chr5 7184834 7189825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0568 31 377 Receptor kinase-like Gene Family AT1G56120 49.280 4.12e-107 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0568 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0568 - - gmx:100782320 662.914