Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0563 ATGGAGGATACTACTAATCAATGGAGTCGCTATGACCATGACCCACTTCTTCTTACTGACGTTTCTTTGCAACAAGAATCCTTTTCTTATACTCGCGGCTCCAATTCTCTTTCGCAAACATCACTGAGCTCTCGGAGTTTAGCTATGGAGGATGAGCCCGTGTGTGGTGACGGCCCTAGTATCGGGTTTTCTCGGGAAAATGGAGGTTTTGAAGGGAACAGCGTGAAGTTCGATGACCCAATTGTGAAAGATGTGTTTGATGGAAGATCTATTTTGGGGTATTCTCTGGCATCCCCAGATTTGGTCATTTGTGCTGGATCACCAGATATTGCTGGAATTAGCTGTTGTGATTCCCCTGAGTTTTTGAAGAACCAATATTGCAAGAATGTGGAGTCATCCATGGAGCTTTCTCTAGAGTATGGAATCAAGGGGTCTGAAGTTGAAGTTGACAATGGCCATAAGATGCCAACTGTTAAATTCTCCAACTTCTGTCAAACGTTTGAGCAAGAGGAAGAGCTTCTGAGCCCTGAAGCCTCCTTTGAGCTTCTTCCACCCCTTCTAACCAAGGATGAGTCACCCCATGATTCCCCTCCAAGAGATATTGAGATGCTAGAAGATGATGGAGTGTCTGGGGAGGCAGAATTGGAGTCCTCAGAAGATGCCGATGATACTGGGGTAGAAGAGAAATTTAAAAGGTTGAAAAGAGACTTTGAGGGTCAGAAAAAGGAGCTGGTAGAAGCAAGGAGGGAGTTAAGGGAGATCAAGAGGGAGAATCAACAGAAGAGTAGAGAATGTCAAGAAGCTTGTAACTCCTTGAAAGAGCTTCAGAATGAGCTAATGCGCAAGTCCATGCACGTAGGATCTTTAGCATTTGCCATTGAGGGGCAAGTGAAAGAGAAAAGCAGGTGGTTTTCGTCACTGAGAGATTTAACAAGGAAATTGAAGATTATGAAAATGGAACACATCAAGCTATTAGAAGAAGCTGAGGAGAGCAAAAAATATCAAGCAGATATGCAAGAAATGGGGCTTATTATCAACTCCAAAATAAATGAACAACTGGAGTCCCTTGGAGATCTCAAGTCCAAATATGCCGAAGGGGTTAAGGAAAGGAAAGAGCTTTACAACAAGGTTTTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGTTGTAGGCCTCTCAACACTGAAGAGATAGCCGCAGGAGCAACCATGGCCTTAGATTTTGAAGCTGCGAAAGATGGTGAGCTAACTGTAATGTCAAATGGAGCTCCTAAAAAGACTTTCAAGTTCGATACTGTCTTTGATCCCCAAGCTGAACAAGCTGATATTTTTGAAGACACAGCACCGTTTGCAACGTCAGTTCTAGATGGATTCAACGTATGCATTTTTGCATATGGACAGACTGGGACAGGAAAAACTTTCACAATGGAGGGCAGTGAAGAGGCTCGAGGTGTAAACTTTAGGACTCTCGAAAAAATGTTCGACATAATCAAGGAGAGACAGAAGTTTTATTGTTATGATGTTTCTGTAAGTGTCTTAGAAGTGTACAATGAGCAAATAAGAGATTTGCTGGTTGCAGGAAATCATCAAGGAGCAGCTGCAAAAAGACTTGAAATAAGGCAAGCTGGTGAAGGAATACATCACATTCCAGGATTGGTTGAGGCACATGTGAACAATATGACTGAAGTCTGGGAAGTTCTACAAACTGGAAGCAATGCAAGGGCAGTAAGCTCAACCAATTCCAATGAGCATAGCAGTCGATCACACTGCATTCACTGTGTTATGGTTAAGGGAGAGAATTTGTTGAATGGAGAATGCACGAGAAGCAAGCTATGGTTGGTGGATCTAGCAGGCAGTGAGCGAGTGGCAAAGACAGAAGTTCATGGTGATAGATTGAAGGAGACACAGAATATTAACAGGTCTCTGTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACGAAAAGTTCACACATCCCTTTCAGGAACTCCAAGCTTACACACTTGTTGCAAGACTCATTAGGAGGAGATTCAAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAACGATTTGAGTGAGACAATTTGTTCTCTTAACTTTGCCAGTAGAGTAAGAGGAATAGAATTGGGGCCCGCAAGGAGACAGTTGGACACTGTTGAGCTTTTGCGACACAAACAAATGGCTGATAAAGTCAAACAAGAGGTAAAGCTGAAGGATTTGCAAATCAAGAAGATGGAGGAAACAATCCATGGATTAGAGTCCAAGATGAAGGAAAGAGACAGCAAAAACAAAAATCTGCAAGAGAAGGTCAAGGAACTGGAATCACAGCTTCTGATTGAGAGAAAGCTGGCGCGTCAACATGTAGACTCAAAGATAGCCGAGCAGCACCAAATGAAACATCAAGAAGAGCAAAATAATGCACTTATGAGATCAGCACTTGCAAATCGACCACTAGGAAGCATCAAGAATTTCAATGATCCAGTGAGTGGTGGATGGTGCAAGGACCAACAAATGAATTCAGCTAAACCACTCACAGAGAACAACAACCTCTTTAAACCTTTTATACCCTTTGCTACAATGGAGAGCTCCATGAAGTGCATTGACCATGCTGAGAAAGAAAACAATCCTGACATGGCTGACAAAGCCCTACTGCCAAAGAGGCTTGCAAGGGCTTCTTCCATCTGCATGATGGCACCACGTGTTCCTTCAGCCATTGCTTCAAGGAGAAACTCCCTGATTCCACTCCCAAGTATTCCTAGCTTAACACAGTTCCAATCACCACTATTACCAAATCTGACAAACCAAGCTGACCAGAAAGATGTCATTGGGGAAGTAGAAACCAACTATGTGCCTGCACAGACTCATTGTGAGAGTCCAAAAGAAGTTAGAAGTGGTGCTAAGAGAATAGGTAGCATACTAAGAAGAAGCCTTCATAAGAAAATCCAAGTGAAGTCTCCACTTCAGCAGCACATGAGGAAGGTTGGTGTAAATGTAGGGATGGAGAAAGTTAGAGTTTCTATTGGAAGTAGGGGGAGATTGGCTCCAAGGGGGCAAGCAGGGAAAAAAGGAGGAGCTAAAGATATTCAACAAAAGAACAGTCAAAAGGAAAAGGAAAGAGGATGGATCTGA 3135 0.43 MEDTTNQWSRYDHDPLLLTDVSLQQESFSYTRGSNSLSQTSLSSRSLAMEDEPVCGDGPSIGFSRENGGFEGNSVKFDDPIVKDVFDGRSILGYSLASPDLVICAGSPDIAGISCCDSPEFLKNQYCKNVESSMELSLEYGIKGSEVEVDNGHKMPTVKFSNFCQTFEQEEELLSPEASFELLPPLLTKDESPHDSPPRDIEMLEDDGVSGEAELESSEDADDTGVEEKFKRLKRDFEGQKKELVEARRELREIKRENQQKSRECQEACNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSLRDLTRKLKIMKMEHIKLLEEAEESKKYQADMQEMGLIINSKINEQLESLGDLKSKYAEGVKERKELYNKVLELRGNIRVFCRCRPLNTEEIAAGATMALDFEAAKDGELTVMSNGAPKKTFKFDTVFDPQAEQADIFEDTAPFATSVLDGFNVCIFAYGQTGTGKTFTMEGSEEARGVNFRTLEKMFDIIKERQKFYCYDVSVSVLEVYNEQIRDLLVAGNHQGAAAKRLEIRQAGEGIHHIPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNSNEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVHGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPARRQLDTVELLRHKQMADKVKQEVKLKDLQIKKMEETIHGLESKMKERDSKNKNLQEKVKELESQLLIERKLARQHVDSKIAEQHQMKHQEEQNNALMRSALANRPLGSIKNFNDPVSGGWCKDQQMNSAKPLTENNNLFKPFIPFATMESSMKCIDHAEKENNPDMADKALLPKRLARASSICMMAPRVPSAIASRRNSLIPLPSIPSLTQFQSPLLPNLTNQADQKDVIGEVETNYVPAQTHCESPKEVRSGAKRIGSILRRSLHKKIQVKSPLQQHMRKVGVNVGMEKVRVSIGSRGRLAPRGQAGKKGGAKDIQQKNSQKEKERGWI* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0563 1044 MobiDBLite consensus disorder prediction 1030 1044 - -
Pvu5g0563 1044 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 217 1026 - -
Pvu5g0563 1044 Coils Coil 730 785 - -
Pvu5g0563 1044 Coils Coil 307 327 - -
Pvu5g0563 1044 ProSitePatterns Kinesin motor domain signature. 609 620 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu5g0563 1044 Gene3D Kinesin motor domain 322 711 IPR036961 -
Pvu5g0563 1044 MobiDBLite consensus disorder prediction 1009 1044 - -
Pvu5g0563 1044 MobiDBLite consensus disorder prediction 187 226 - -
Pvu5g0563 1044 PANTHER KINESIN-LIKE PROTEIN KLP-3 217 1026 - -
Pvu5g0563 1044 PRINTS Kinesin heavy chain signature 457 478 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g0563 1044 PRINTS Kinesin heavy chain signature 579 596 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g0563 1044 PRINTS Kinesin heavy chain signature 610 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g0563 1044 PRINTS Kinesin heavy chain signature 659 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g0563 1044 CDD KISc_C_terminal 381 711 - -
Pvu5g0563 1044 ProSiteProfiles Kinesin motor domain profile. 383 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g0563 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 383 747 IPR027417 -
Pvu5g0563 1044 MobiDBLite consensus disorder prediction 207 223 - -
Pvu5g0563 1044 MobiDBLite consensus disorder prediction 192 206 - -
Pvu5g0563 1044 SMART kinesin_4 381 717 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g0563 1044 Pfam Kinesin motor domain 389 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g0563 1044 Coils Coil 230 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0563 Pvu-Chr5 7101564 7106753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0563 325 736 Calmodulin-binding Proteins AT5G65930 40.338 5.87e-82 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0563 K10406 - gmx:100817247 1804.65