Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0560 ATGAGTATGGCTGATGAGGTGGTTCTGCTAGATTTCTGGCCAAGTCCATTTGGGATGAGGGTGAGGATCGCACTTGCTGAAAAGGGTATAAACTATGAGTACAAAGAAGAGGACTTGAAGAACAAGAGTCCTCTTCTCCTCCATATGAACCCAGTTCACAAGAAAATTCCTGTTCTCATTCACAAGGGCAAGCCCATTTCTGAATCTCTTATTGCTGTTCAATACATTGACGAGGTTTGGCATGACAGAACTCCCTTGTTACCTTCTGACCCTTACCAGAGAGCTCAGGCTAGATTCTGGGTTGACTATGTTGACAAGAAGATGTATGATCTTGGAAGGAAGATTGTCTGGACATCAAAAGGAGAAGAAAAAGAAGTTGCTAAGAAGGAGTTCATAGAAGTCCTTAAAGTGTTGGAGGAACAGCTGGGAGACAAGACTTATTTTGGAGGAGACAATCTTGGTTTTGTGGATGTAGCACTTGTACCATTTTACACTTGGTTTGAAGCCTATGAGACTTTTGGAGGTCTCAACTTAGAGAGTGAGTGCCCCAAGTTTATTGCTTGGGCCAAGAGGTGCCTCCAGAAAGAGAGTGTTGCTAAGTCTCTTCCTGATCAACATAAGATCCATGAGATCATTGTGGAGATGAGAAAGAAATCAGGCCTTCAGTAG 669 0.4305 MSMADEVVLLDFWPSPFGMRVRIALAEKGINYEYKEEDLKNKSPLLLHMNPVHKKIPVLIHKGKPISESLIAVQYIDEVWHDRTPLLPSDPYQRAQARFWVDYVDKKMYDLGRKIVWTSKGEEKEVAKKEFIEVLKVLEEQLGDKTYFGGDNLGFVDVALVPFYTWFEAYETFGGLNLESECPKFIAWAKRCLQKESVAKSLPDQHKIHEIIVEMRKKSGLQ* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0560 222 Gene3D - 90 222 - -
Pvu5g0560 222 SUPERFAMILY GST C-terminal domain-like 78 218 IPR036282 -
Pvu5g0560 222 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Pvu5g0560 222 SFLD Main (cytGST) 3 219 - -
Pvu5g0560 222 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Pvu5g0560 222 Gene3D Glutaredoxin 3 89 - -
Pvu5g0560 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Pvu5g0560 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Pvu5g0560 222 PANTHER S-TRANSFERASE TAU 22, PUTATIVE-RELATED 6 217 - -
Pvu5g0560 222 SFLD Main.3: Omega- and Tau-like 3 219 IPR045073 -
Pvu5g0560 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 217 IPR045073 -
Pvu5g0560 222 CDD GST_N_Tau 7 80 - -
Pvu5g0560 222 Pfam Glutathione S-transferase, C-terminal domain 127 191 - -
Pvu5g0560 222 Pfam Glutathione S-transferase, N-terminal domain 8 78 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0560 Pvu-Chr5 7030330 7031597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0560 3 218 Glutathione S-transferase Gene Family AT1G78380 68.519 7.32e-115 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0560 K00799 - gmx:547520 404.06