Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0554 ATGACTCTCCGGAAAGTTGGAGAAGAAGTAGGTTGTGAAGTTGCATGCAGAGCGGCATTGCTGACCTTCGTTTCTCCTCCCGCGATCCTCCCGCCTGAGGAAGACCCTTGCATCTTCCCCGCGACCCCTCTCACTCTCAACTCTATTCCTCTCGTAGCCTCTCTCTCTCACTCTCACTGCATATCTTATTTAGTTGATGATTATTTGCAGGTCATAAATGAAACCATCAGGCTGGCAAACATAGTTCCAGGAATATTTCGGAAGACACTACAGGAGATTAAATATGGGGGATACACCATACCAGCAGGGTGGGCAATAATGGTGTGTCCCCCAGCTGTACACTTGAACCCGACCATATACCAAGATCCTCTTTCCTTCAACCCATGCAGATGGCTGGGAATGGATATGAGCCCCGCAAGCAAACATTTAATGGGTTTTGGTGGAGGCATAAGATTTTGTGTTGGAGCAGACTTTGCAAAGGTTCAGATGGCTGTTTTTCTTCATAACTTGGTTACAAAGTATAGGTGGCGACCCATCAAAGGAGGGAATATTGTTCGAAATCTTGGGTTACAATTTCCTGAAGGCTTTTATGTCCGGGTAATGAAGAAAGATGCATGGAAGTATGAATCAGAATGA 636 0.4575 MTLRKVGEEVGCEVACRAALLTFVSPPAILPPEEDPCIFPATPLTLNSIPLVASLSHSHCISYLVDDYLQVINETIRLANIVPGIFRKTLQEIKYGGYTIPAGWAIMVCPPAVHLNPTIYQDPLSFNPCRWLGMDMSPASKHLMGFGGGIRFCVGADFAKVQMAVFLHNLVTKYRWRPIKGGNIVRNLGLQFPEGFYVRVMKKDAWKYESE* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0554 211 PRINTS E-class P450 group IV signature 65 81 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0554 211 PRINTS E-class P450 group IV signature 98 112 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0554 211 PRINTS E-class P450 group IV signature 114 132 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0554 211 PRINTS E-class P450 group IV signature 137 153 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0554 211 PRINTS E-class P450 group IV signature 153 171 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0554 211 Gene3D Cytochrome P450 47 208 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0554 211 Pfam Cytochrome P450 70 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0554 211 PANTHER CYTOCHROME P450 26 70 200 - -
Pvu5g0554 211 SUPERFAMILY Cytochrome P450 70 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0554 211 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 146 155 IPR017972 GO:0005506|GO:0016705
Pvu5g0554 211 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 70 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0554 Pvu-Chr5 6964551 6965795 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0554 69 203 Cytochrome P450 AT1G12740 66.667 5.89e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0554 - - pvu:PHAVU_005G053600g 442.965