Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0552 ATGTGGGTTCTATGTCTTGCAACATTGTTTTTTATAGGCATAACACATTGGGTTTATAGATGGAGAAACCCTAGTTGCAATGGAAAACTCCCACCTGGTTCAATGGGTTTGCCCCTTCTTGGTGAATCCCTTAAGTTTTTCACCCCCTACTCTTCTTCTGATATTCATCCATTCATAAAGCAGAAAGTGGAGAGGTATGGACCAATCTTCAAGACAGGCTTTGCTGGACGACCAACTGTGGTGTCCACTGACCAGAAATTTAATAACTTAATATTCCAACAAGAAGGAGAAATGTTCCAGAGCTGGTACCCAGATACACTAAACAAGATTTTTGGGAGACAAAATTTATCTTCCCTGCATGGTTCTGTGTTCAAGTACGTTAAGAACATGGTGCTCCATATGTTTGGTCCTGAAGGCCTCAAAAGGATGCTCTCAGAGGTGGAACAGAAAGCGTGCACAACATTGCAGCAGTGGTCATGTCAGGATACTCTTGAGTTATGCGATGCAACAAAAAGGATGATATTTGAGTTGACTGCAAAAAAACTTCTCAGTTGTGATTCGAAAGAGACTTTAGAGAGTTTAATGGACAACTTTAATTCATTTATGGAAGGACTCATCTCGCTCCCTCTCAACATTCCAGGAACAGCTTATCACAAATGTTTGCAGGGTAGGAAAAGGGCAATGAAGACACTGAAGAGCATGCTGAAGGAAAGAAGGGAAAAGCCTAGGAAAGAAGTAAGCGATTTCTTTGATTATGTAGTGGAAGAACTTTCAAAAGAGGGAACACCACTCAATGAAGAGATGGCTTTGGACCTCATGTTTACGCTACTCTTTGCAAGCTTTGAAACCACTTCTTTGGCTCTCACATATGCCATTAAAGAACTATCTCACCATCCCTCAGTGCTGAAGAAATTACAAGAAGAACATGAAGGCATCCTGAAAGGTCGTGAAGATCCAAACTCTGAACTTACATGGCATGAGTACAAATCAATGACTTTTACATTTCAGGTCATAAATGAAACCATCAGGTTGGCAAACATAGTTCCAGGAATATTTCGGAAGACACTACAGGAGATTAAATATGGGGGATACACCATACCAGCAGGGTGGGCAATAATGGTGTGTCCCCCAGCTGTACACTTGAACCCGACCATATACGATGATCCTCTCTCCTTCAACCCAAGCAGATGGGTGGGAATGGATATGAGTCCCGCAAGCAAACATTTAATGGGTTTTGGTGGAGGCATAAGATTTTGTGTTGGAGCAGACTTTGCAAAGGTTCAGATGGCTGTTTTTCTTCATAACTTGGTTACAAAGTATAGGTGGCGACCCATCAAAGGAGGGAATATTGTTCGAAATCTTGGGTTACAATTTCCTGAAGGCTTTTATGTCCGGGTAATGAAGAAAGATGCATGGAAGTATGAATCAGAATGA 1434 0.4156 MWVLCLATLFFIGITHWVYRWRNPSCNGKLPPGSMGLPLLGESLKFFTPYSSSDIHPFIKQKVERYGPIFKTGFAGRPTVVSTDQKFNNLIFQQEGEMFQSWYPDTLNKIFGRQNLSSLHGSVFKYVKNMVLHMFGPEGLKRMLSEVEQKACTTLQQWSCQDTLELCDATKRMIFELTAKKLLSCDSKETLESLMDNFNSFMEGLISLPLNIPGTAYHKCLQGRKRAMKTLKSMLKERREKPRKEVSDFFDYVVEELSKEGTPLNEEMALDLMFTLLFASFETTSLALTYAIKELSHHPSVLKKLQEEHEGILKGREDPNSELTWHEYKSMTFTFQVINETIRLANIVPGIFRKTLQEIKYGGYTIPAGWAIMVCPPAVHLNPTIYDDPLSFNPSRWVGMDMSPASKHLMGFGGGIRFCVGADFAKVQMAVFLHNLVTKYRWRPIKGGNIVRNLGLQFPEGFYVRVMKKDAWKYESE* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0552 477 Gene3D Cytochrome P450 22 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 SUPERFAMILY Cytochrome P450 24 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Pvu5g0552 477 Pfam Cytochrome P450 31 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 8 466 - -
Pvu5g0552 477 PRINTS E-class P450 group IV signature 30 47 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PRINTS E-class P450 group IV signature 331 347 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PRINTS E-class P450 group IV signature 364 378 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PRINTS E-class P450 group IV signature 380 398 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PRINTS E-class P450 group IV signature 403 419 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PRINTS E-class P450 group IV signature 419 437 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0552 477 PANTHER CYTOCHROME P450 26 8 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0552 Pvu-Chr5 6937002 6940503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0552 1 469 Cytochrome P450 AT1G12740 65.546 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0552 - - gmx:100794607 716.457