Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0543 ATGGCTTCTTTCCAAAACATCAACATTGAGACTCAAATACCAGAAGAGATTCTCATAGCTCAGATTATGCAACTTCATGAAAGCATCTCCAAACTTGAATCCCTTAGGCCTTGCAAGCAAGTGAATAGCCTTTTCACTCGTCTTGTGAAACTTTGCACTCTCCCTTCATCCATTGACATTGAGGCCTTGCCTCAAGAGGTGAAAGAGATGCGTGACAGCCTCATTAACCTTAGTGGCCATGCCGAGGGACTCTTAGAGTTTGAGTTCTCAACCTTCATAAGCCTAACACCCGAGCCCTTCAAGAATGTGACCCTTTTCCCTTACTATGGGAACTATGTGAAACTAGCACACATGGAGAACAAAATCCTCAAAGAAAATGGGATGGTTAATGCAAAGAAAGTGGCCTTTGTAGGGTCAGGTCCAATGCCACTCACTTCCATCATAATGGCCACTCACCACATGGAGTCCACACACTTTGACAACTTTGACATTGATGAGAAGGCAAACGAGGTGGCTCGAAAGATTGTTGCTTCTGATGCAGCACTTGAGAAGAGGATGAAGTTTGTGACACAAGACATCATGGAAGTTAGAGAGAGGTTGGGGCAATATGATTGCATCTTTTTGGCAGCACTTGTGGGCATGAATAGGGAAGCAAAAGTGAAGATTTTGGGACACATAAGGAAGTATATGAAGGAGGGAGGGATCTTGCTTGTGAGAAGTGCAAAAGGGTCAAGAGCTTTCTTGTACCCTATTCTTGAGGAACCTGACATGGTGAATTTTGAGGTTCTTACCATCTTTCACCCCACAAATGATGTGATCAATTCGGTAGTTCTTCTTCGCAAGCCTAAAGCTTAG 855 0.4374 MASFQNINIETQIPEEILIAQIMQLHESISKLESLRPCKQVNSLFTRLVKLCTLPSSIDIEALPQEVKEMRDSLINLSGHAEGLLEFEFSTFISLTPEPFKNVTLFPYYGNYVKLAHMENKILKENGMVNAKKVAFVGSGPMPLTSIIMATHHMESTHFDNFDIDEKANEVARKIVASDAALEKRMKFVTQDIMEVRERLGQYDCIFLAALVGMNREAKVKILGHIRKYMKEGGILLVRSAKGSRAFLYPILEEPDMVNFEVLTIFHPTNDVINSVVLLRKPKA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0543 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 240 IPR029063 -
Pvu5g0543 284 Gene3D Vaccinia Virus protein VP39 16 283 IPR029063 -
Pvu5g0543 284 CDD AdoMet_MTases 162 238 - -
Pvu5g0543 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Pvu5g0543 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Pvu5g0543 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 284 IPR004298 GO:0030410|GO:0030418
Pvu5g0543 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0543 Pvu-Chr5 6792804 6793658 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0543 15 281 Nicotianamine Synthase Gene Family AT1G56430 48.339 1.71e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0543 K05953 - gmx:100819726 501.13